A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | X

A

AbstractGrid (IMP.isd.AbstractGrid)

DependencyScoreState (IMP::domino)

InContainerSingletonFilter (IMP::container)

ParticlesDummyRestraint (IMP::em2d)

Showable (IMP::base)

AbstractService (IMP.isd.AbstractGrid)

DerivativeAccumulator (IMP::kernel)

InContainerTripletFilter (IMP::container)

ParticleStates (IMP::domino)

SimpleAssignmentsTable (IMP::domino)

AddBoolFlag (IMP::base)

DerivativesFromRefined (IMP::core)

IncrementalScoringFunction (IMP::core)

ParticleStatesTable (IMP::domino)

SimpleConnectivity (IMP::restrainer)

AddFloatFlag (IMP::base)

DerivativesToRefined (IMP::core)

Index (IMP::base)

PartitionalClustering (IMP::statistics)

SimpleDiameter (IMP::restrainer)

AddIntFlag (IMP::base)

DiameterRestraint (IMP::core)

IndexException (IMP::base)

PartitionalClusteringWithCenter (IMP::statistics)

SimpleDistance (IMP::restrainer)

AddScores (IMP::score_functor)

Diffusion (IMP::atom)

IndexStates (IMP::domino)

PCAAligner (IMP::em)

SimpleEMFit (IMP::restrainer)

AddStringFlag (IMP::base)

Dihedral (IMP::atom)

IndexVector (IMP::base)

PCAFitRestraint (IMP::em)

SimpleExcludedVolume (IMP::restrainer)

AlignmentClustering (IMP.multifit.cluster)

DihedralRestraint (IMP::core)

InitialDockingFromXlinks (IMP.em2d.buildxlinks)

PDBSelector (IMP::atom)

Simplex (IMP::gsl)

AlignSymmetric (IMP::cnmultifit)

DihedralSingletonScore (IMP::atom)

InputAdaptor (IMP::base)

PeriodicOptimizerState (IMP::core)

Simulator (IMP::atom)

AllBipartitePairContainer (IMP::container)

DirectorObjectChecker (IMP.test)

InternalException (IMP::base)

PermutationStates (IMP::domino)

SingletonConstraint (IMP::core)

AllMol2Selector (IMP::atom)

DiscreteSampler (IMP::domino)

IOException (IMP::base)

piecewise_linear_distribution (IMP::base)

SingletonContainer (IMP::kernel)

AllPairContainer (IMP::container)

DisjointSetsSubsetFilterTable (IMP::domino)

ISDRestraint (IMP::isd)

Pipe (IMP.isd.utils)

SingletonContainerAdaptor (IMP::kernel)

AllPDBSelector (IMP::atom)

Display (IMP.restrainer)

IsosurfaceGeometry (IMP::display)

PivyWriter (IMP::display)

SingletonContainerSet (IMP::container)

AllSamePairPredicate (IMP::core)

DistanceFilterTable (IMP::em2d)

J

Plane3D (IMP::algebra)

SingletonContainerStatistics (IMP::container)

AllSameQuadPredicate (IMP::core)

DistanceMask (IMP::em)

PlaneGeometry (IMP::display)

SingletonGeometry (IMP::display)

AllSameSingletonPredicate (IMP::core)

DistancePairScore (IMP::score_functor)

JeffreysRestraint (IMP::isd)

Pointer (IMP::base)

SingletonModifier (IMP::kernel)

AllSameTripletPredicate (IMP::core)

DistancePairScore (IMP::core)

JPGImageReaderWriter (IMP::em2d)

PointGeometry (IMP::display)

SingletonPredicate (IMP::kernel)

AmbiguousNOERestraint (IMP::isd)

DistanceRestraint (IMP::core)

K

PolarResamplingParameters (IMP::em2d)

SingletonRestraint (IMP::core)

AmbiguousRestraint (IMP::isd)

DistributePairsScoreState (IMP::container)

PolygonGeometry (IMP::display)

SingletonsConstraint (IMP::container)

Analysis (IMP.isd.Analysis)

DistributeQuadsScoreState (IMP::container)

KClosePairsPairScore (IMP::core)

PPDBSelector (IMP::atom)

SingletonScore (IMP::kernel)

AndPDBSelector (IMP::atom)

DistributeSingletonsScoreState (IMP::container)

KernelParameters (IMP::em)

PredicatePairsRestraint (IMP::container)

SingletonsGeometry (IMP::display)

Angle (IMP::atom)

DistributeTripletsScoreState (IMP::container)

Key (IMP::kernel)

PredicateQuadsRestraint (IMP::container)

SingletonsOptimizerState (IMP::container)

AngleRestraint (IMP::core)

Distribution (IMP::saxs)

KMeans (IMP::kmeans)

PredicateSingletonScore (IMP::core)

SingletonsRestraint (IMP::container)

AngleSingletonScore (IMP::atom)

DockOrder (IMP.em2d.buildxlinks)

L

PredicateSingletonsRestraint (IMP::container)

SkinSurfaceGeometry (IMP::display)

AngleTripletScore (IMP::core)

Domain (IMP::atom)

PredicateTripletsRestraint (IMP::container)

Slave (IMP.parallel)

ApplicationTestCase (IMP.test)

DominoModel (IMP.em2d.DominoModel)

LabelGeometry (IMP::display)

PrincipalComponentAnalysisD (IMP::algebra)

SlaveArray (IMP.parallel)

Array (IMP::base)

DominoSampler (IMP::domino)

LangevinThermostatOptimizerState (IMP::atom)

ProbabilisticSubsetFilterTable (IMP::domino)

Slice (IMP::domino)

AssemblyHeader (IMP::multifit)

Dope (IMP::score_functor)

LeavesRefiner (IMP::core)

Profile (IMP::saxs)

SlidingPriorRestraint (IMP::isd)

Assignment (IMP::domino)

DopePairScore (IMP::atom)

LennardJones (IMP::atom)

Profiler (IMP::benchmark)

SmoothingFunction (IMP::atom)

AssignmentContainer (IMP::domino)

DummyRestraint (IMP::em2d)

LennardJonesPairScore (IMP::atom)

ProjectionFinder (IMP::em2d)

SoftCylinderPairScore (IMP::misc)

AssignmentsTable (IMP::domino)

DynamicListPairContainer (IMP::container)

LessPairBySecond (IMP::em2d)

ProjectionMask (IMP::em2d)

SoftSpherePairScore (IMP::core)

Atom (IMP::atom)

DynamicListQuadContainer (IMP::container)

Linear (IMP::core)

ProjectionParameters (IMP::em2d)

SolventAccessibleSurface (IMP::saxs)

ATOMPDBSelector (IMP::atom)

DynamicListSingletonContainer (IMP::container)

Linear1DFunction (IMP::isd)

ProjectionParametersScoreState (IMP::em2d)

SparseGrid3D (IMP::algebra)

AtomType (IMP::atom)

DynamicListTripletContainer (IMP::container)

LinearFit2D (IMP::algebra)

ProjectionStates (IMP::em2d)

SparseGridStorageD (IMP::algebra)

AttributeSingletonPredicate (IMP::core)

DynamicNearestNeighbor3D (IMP::algebra)

LinearLowerBound (IMP::score_functor)

ProteinLigandAtomPairScore (IMP::atom)

SparseSymmetricPairMemoizer (IMP::base)

B

E

ListAssignmentContainer (IMP::domino)

ProteinLigandRestraint (IMP::atom)

SparseUnboundedGrid3D (IMP::algebra)

ListAssignmentsTable (IMP::domino)

ProteinsAnchorsSamplingSpace (IMP::multifit)

SparseUnboundedGridD (IMP::algebra)

BallMover (IMP::core)

EdgePairGeometry (IMP::core)

ListPairContainer (IMP::container)

PymolWriter (IMP::display)

SphereD (IMP::algebra)

BerendsenThermostatOptimizerState (IMP::atom)

EdgePairsGeometry (IMP::core)

ListQuadContainer (IMP::container)

PyroHandler (IMP.isd.PyroGrid)

SphereDistance (IMP::score_functor)

BildWriter (IMP::display)

ElementTable (IMP::atom)

ListSingletonContainer (IMP::container)

PyroProxy (IMP.isd.PyroGrid)

SphereDistancePairScore (IMP::core)

BinormalTerm (IMP::modeller)

Ellipsoid3D (IMP::algebra)

ListSubsetFilterTable (IMP::domino)

PythonDirectedGraph (IMP::kernel)

SphereDistanceToSingletonScore (IMP::core)

BivariateFunction (IMP::isd)

EllipsoidGeometry (IMP::display)

ListTripletContainer (IMP::container)

Q

SphereGeometry (IMP::display)

Bond (IMP::atom)

Em2DRestraint (IMP::em2d)

LoadLink (IMP::rmf)

SpherePatch3D (IMP::algebra)

Bonded (IMP::atom)

EM2DScore (IMP::em2d)

LocalSlave (IMP.parallel)

QuadConstraint (IMP::core)

SphericalVector3D (IMP::algebra)

BondedPairFilter (IMP::atom)

Embedding (IMP::statistics)

LogEmbeddingD (IMP::algebra)

QuadContainer (IMP::kernel)

SpiderHeader (IMP::em)

BondEndpointsRefiner (IMP::atom)

Entry (IMP.isd.Entry)

LogicalORRestraint (IMP::isd)

QuadContainerAdaptor (IMP::kernel)

SpiderImageReaderWriter (IMP::em2d)

BondGeometry (IMP::atom)

EnvelopeFitRestraint (IMP::em)

LognormalRestraint (IMP::isd)

QuadContainerSet (IMP::container)

SpiderMapReaderWriter (IMP::em)

BondGraph (IMP::atom)

EnvelopePenetrationRestraint (IMP::em)

LogPairScore (IMP::misc)

QuadContainerStatistics (IMP::container)

StateAdaptor (IMP::misc)

BondPairContainer (IMP::atom)

EnvelopeScore (IMP::em)

LowestRefinedPairScore (IMP::misc)

QuadModifier (IMP::kernel)

Statistical (IMP::score_functor)

BondsGeometry (IMP::atom)

EqualitySubsetFilterTable (IMP::domino)

LRUCache (IMP::base)

QuadPredicate (IMP::kernel)

StatisticalPairScore (IMP::core)

BondSingletonScore (IMP::atom)

EquivalenceAndExclusionSubsetFilterTable (IMP::domino)

M

QuadraticClosePairsFinder (IMP::core)

Statistics (IMP.isd.Statistics)

BoundedGridRangeD (IMP::algebra)

EquivalenceSubsetFilterTable (IMP::domino)

QuadRestraint (IMP::core)

SteepestDescent (IMP::core)

BoundingBoxD (IMP::algebra)

Error (IMP.parallel)

MaintainScaleOrderConstraint (IMP::isd)

QuadsConstraint (IMP::container)

StereochemistryPairFilter (IMP::atom)

BoundingBoxGeometry (IMP::display)

EuclideanVectorKDMetric (IMP::algebra)

Manager (IMP.parallel)

QuadScore (IMP::kernel)

Subset (IMP::domino)

BoxSweepClosePairsFinder (IMP::core)

EvaluationState (IMP::kernel)

map (IMP::base)

QuadsOptimizerState (IMP::container)

SubsetFilter (IMP::domino)

BranchAndBoundAssignmentsTable (IMP::domino)

EventException (IMP::base)

MapDistanceTransform (IMP::em)

QuadsRestraint (IMP::container)

SubsetFilterTable (IMP::domino)

BranchAndBoundSampler (IMP::domino)

EventPairsOptimizerState (IMP::container)

MapReaderWriter (IMP::em)

QuasiNewton (IMP::gsl)

SurfaceMeshGeometry (IMP::display)

BrownianDynamics (IMP::atom)

EventQuadsOptimizerState (IMP::container)

MarginalHBondRestraint (IMP::isd)

R

SurfaceShellDensityMap (IMP::em)

C

EventSingletonsOptimizerState (IMP::container)

MarginalNOERestraint (IMP::isd)

Switching (IMP::isd)

EventTripletsOptimizerState (IMP::container)

MasksManager (IMP::em2d)

RadialDistributionFunction (IMP::saxs)

T

CAlphaPDBSelector (IMP::atom)

ExampleComplexRestraint (IMP::example)

Mass (IMP::atom)

RadiusDependentKernelParameters (IMP::em)

CappedAssignmentContainer (IMP::domino)

ExampleConstraint (IMP::example)

MatchTemplateResult (IMP::em2d)

RadiusOfGyrationRestraint (IMP::multifit)

TableRefiner (IMP::core)

CBetaPDBSelector (IMP::atom)

ExampleDecorator (IMP::example)

MaxVectorKDMetric (IMP::algebra)

RadiusOfGyrationRestraint (IMP::saxs)

TALOSReader (IMP.isd.TALOSReader)

CenteredMat (IMP::em2d)

ExamplePairScore (IMP::example)

MCCGSampler (IMP::core)

RAII (IMP::base)

TALOSRestraint (IMP::isd)

Centroid (IMP::core)

ExampleRefCounted (IMP::example)

Memoizer (IMP::base)

RangeViewAssignmentContainer (IMP::domino)

TestCase (IMP.test)

CentroidOfRefined (IMP::core)

ExampleRestraint (IMP::example)

Metric (IMP::statistics)

ReadAssignmentContainer (IMP::domino)

TextInput (IMP::base)

Chain (IMP::atom)

ExampleSingletonModifier (IMP::example)

MinimumPairRestraint (IMP::container)

ReadHDF5AssignmentContainer (IMP::domino)

TextOutput (IMP::base)

ChainPDBSelector (IMP::atom)

ExampleSubsetFilterTable (IMP::example)

MinimumPairScore (IMP::container)

RecursiveAssignmentsTable (IMP::domino)

TextWriter (IMP::display)

Charged (IMP::atom)

ExampleTemplateClassD (IMP::example)

MinimumQuadRestraint (IMP::container)

RecursivePartitionalClusteringEmbedding (IMP::statistics)

TrackedObject (IMP::base)

CHARMMAtom (IMP::atom)

ExampleUnaryFunction (IMP::example)

MinimumQuadScore (IMP::container)

RecursivePartitionalClusteringMetric (IMP::statistics)

Tracker (IMP::base)

CHARMMAtomTopology (IMP::atom)

Exception (IMP::base)

MinimumRestraint (IMP::core)

RecursiveStates (IMP::domino)

Transform (IMP::core)

CHARMMBondEndpoint (IMP::atom)

ExcludedVolumeRestraint (IMP::core)

MinimumRestraintScoreSubsetFilterTable (IMP::domino)

RefCountChecker (IMP.test)

Transformation2D (IMP::algebra)

CHARMMBondParameters (IMP::atom)

ExclusionSubsetFilterTable (IMP::domino)

MinimumSingletonRestraint (IMP::container)

RefCounted (IMP::base)

Transformation3D (IMP::algebra)

CHARMMConnection (IMP::atom)

ExclusiveConsecutivePairContainer (IMP::container)

MinimumSingletonScore (IMP::container)

Reference (IMP::core)

TransformationAndReflectionSymmetry (IMP::core)

CHARMMDihedralParameters (IMP::atom)

ExclusiveConsecutivePairFilter (IMP::container)

MinimumTripletRestraint (IMP::container)

ReferenceFrame3D (IMP::algebra)

TransformationSymmetry (IMP::core)

CHARMMIdealResidueTopology (IMP::atom)

ExtendedGridIndexD (IMP::algebra)

MinimumTripletScore (IMP::container)

ReferenceFrameGeometry (IMP::display)

TransformedDistancePairScore (IMP::core)

CHARMMInternalCoordinate (IMP::atom)

F

Model (IMP::kernel)

RefinedPairsPairScore (IMP::core)

Triangle3D (IMP::algebra)

CHARMMParameters (IMP::atom)

ModelException (IMP::base)

Refiner (IMP::kernel)

TriangleGeometry (IMP::display)

CHARMMPatch (IMP::atom)

FIFOBasedRemoteObject (IMP.isd.FIFOBasedGrid)

ModellerRestraints (IMP.modeller)

Reflection3D (IMP::algebra)

TripletConstraint (IMP::core)

CHARMMResidueTopology (IMP::atom)

FileBasedRemoteObject (IMP.isd.FileBasedGrid)

ModelLoader (IMP.modeller)

RegistrationResult (IMP::em2d)

TripletContainer (IMP::kernel)

CHARMMResidueTopologyBase (IMP::atom)

FilterGeometry (IMP::display)

ModelObject (IMP::kernel)

RemoteError (IMP.parallel)

TripletContainerAdaptor (IMP::kernel)

CHARMMSegmentTopology (IMP::atom)

Fine2DRegistrationRestraint (IMP::em2d)

ModifierVisitor (IMP::core)

RemoveRigidMotionOptimizerState (IMP::atom)

TripletContainerSet (IMP::container)

CHARMMStereochemistryRestraint (IMP::atom)

FitRestraint (IMP::em)

Mol2Selector (IMP::atom)

RemoveTranslationOptimizerState (IMP::atom)

TripletContainerStatistics (IMP::container)

CHARMMTopology (IMP::atom)

FittingSolutionRecord (IMP::multifit)

MolecularDynamics (IMP::atom)

Representation (IMP.restrainer)

TripletModifier (IMP::kernel)

ChecksScoreState (IMP::core)

FittingSolutions (IMP::em)

MolecularDynamics (IMP::isd)

RepulsiveDistancePairScore (IMP::isd)

TripletPredicate (IMP::kernel)

ChildrenRefiner (IMP::core)

FittingStates (IMP::multifit)

MolecularDynamicsMover (IMP::isd)

Residue (IMP::atom)

TripletRestraint (IMP::core)

ChimeraWriter (IMP::display)

FixedRefiner (IMP::core)

Molecule (IMP::atom)

ResidueRotamer (IMP::rotamer)

TripletsConstraint (IMP::container)

ChiSquaredScore (IMP::em2d)

FixedXYZ (IMP::algebra)

MonteCarlo (IMP::core)

ResidueType (IMP::atom)

TripletScore (IMP::kernel)

CloseBipartitePairContainer (IMP::container)

FixedZXZ (IMP::algebra)

MonteCarloMover (IMP::core)

Restraint (IMP::saxs)

TripletsOptimizerState (IMP::container)

ClosedCubicSpline (IMP::core)

FixedZYZ (IMP::algebra)

MonteCarloMoverResult (IMP::core)

Restraint (IMP.restrainer)

TripletsRestraint (IMP::container)

ClosePairContainer (IMP::container)

FloatIndex (IMP::kernel)

MonteCarloRelativeMoves (IMP.em2d.MonteCarloRelativeMoves)

Restraint (IMP::kernel)

TruncatedHarmonic (IMP::core)

ClosePairsFinder (IMP::core)

FNormal (IMP::isd)

MonteCarloWithBasinHopping (IMP::core)

RestraintCache (IMP::domino)

Typed (IMP::core)

ClosePairsPairScore (IMP::core)

ForceFieldParameters (IMP::atom)

MonteCarloWithLocalOptimization (IMP::core)

RestraintGeometry (IMP::display)

TypedPairScore (IMP::core)

ClusterRecord (IMP.em2d.solutions_io)

ForceSwitch (IMP::atom)

Mover (IMP::core)

RestraintScoreSubsetFilterTable (IMP::domino)

U

CMMWriter (IMP::display)

FormFactorTable (IMP::saxs)

MoverBase (IMP::core)

RestraintSet (IMP::kernel)

CoarseCC (IMP::em)

Fragment (IMP::atom)

MoveStatisticsScoreState (IMP::core)

RestraintSetGeometry (IMP::display)

UnaryFunction (IMP::kernel)

CoarseCCatIntervals (IMP::em)

G

MRCReaderWriter (IMP::em)

RestraintsScoringFunction (IMP::core)

UnaryFunctionEvaluate (IMP::score_functor)

CoarseConvolution (IMP::em)

MSConnectivityRestraint (IMP::core)

RestraintStatistics (IMP::kernel)

UnboundedGridRangeD (IMP::algebra)

CoinFlipPairPredicate (IMP::core)

GaussianProcessInterpolation (IMP::isd)

MultipleBinormalRestraint (IMP::modeller)

Result (IMP.isd.AbstractGrid)

UncheckedWeakPointer (IMP::base)

CoinFlipQuadPredicate (IMP::core)

GaussianProcessInterpolationRestraint (IMP::isd)

MultivariateFNormalSufficient (IMP::isd)

ResultsDB (IMP.em2d.solutions_io)

Undecorator (IMP::kernel)

CoinFlipSingletonPredicate (IMP::core)

GaussianRestraint (IMP::isd)

MyMetric (write_a_metric)

RigidBody (IMP::core)

UnivariateFunction (IMP::isd)

CoinFlipTripletPredicate (IMP::core)

GeneralizedGuinierPorodFunction (IMP::isd)

N

RigidBodyDerivativeGeometry (IMP::core)

UnorderedTypePairPredicate (IMP::core)

Color (IMP::display)

GenericAttributeSingletonScore (IMP::core)

RigidBodyDerivativesGeometry (IMP::core)

UnorderedTypeQuadPredicate (IMP::core)

Colored (IMP::display)

GenericBoundingBox3DSingletonScore (IMP::core)

NearestNeighborD (IMP::algebra)

RigidBodyDiffusion (IMP::atom)

UnorderedTypeSingletonPredicate (IMP::core)

CommandDispatcher (IMP.kernel)

GenericDistanceToSingletonScore (IMP::core)

NearestNeighborsClosePairsFinder (IMP::core)

RigidBodyDistancePairScore (IMP::core)

UnorderedTypeTripletPredicate (IMP::core)

CommonEndpointPairFilter (IMP::misc)

GenericScopedRemoveRestraint (IMP::kernel)

NestedRigidBodyStates (IMP::domino)

RigidBodyFrameGeometry (IMP::core)

UsageException (IMP::base)

ComplementarityRestraint (IMP::multifit)

GenericScopedRemoveScoreState (IMP::kernel)

NetworkError (IMP.parallel)

RigidBodyFramesGeometry (IMP::core)

V

ComponentHeader (IMP::multifit)

GenericScopedRestraint (IMP::kernel)

NOERestraint (IMP::isd)

RigidBodyHierarchyGeometry (IMP::core)

CompoundStates (IMP::domino)

GenericScopedScoreState (IMP::kernel)

NoMoreSlavesError (IMP.parallel)

RigidBodyMover (IMP::core)

Value (IMP::base)

Cone3D (IMP::algebra)

GeometricPrimitiveD (IMP::algebra)

NonAlternativePDBSelector (IMP::atom)

RigidBodyStates (IMP::domino)

ValueException (IMP::base)

Configuration (IMP::kernel)

Geometry (IMP::display)

NonCopyable (IMP::base)

RigidBodyTorque (IMP::core)

Vector (IMP::base)

ConfigurationSet (IMP::kernel)

GeometryProcessor (IMP::display)

NonHydrogenMol2Selector (IMP::atom)

RigidClosePairsFinder (IMP::core)

VectorD (IMP::algebra)

ConfigurationSetRMSDMetric (IMP::statistics)

GeometrySet (IMP::display)

NonRigidMember (IMP::core)

RigidMember (IMP::core)

VectorDEmbedding (IMP::statistics)

ConfigurationSetXYZEmbedding (IMP::statistics)

GridClosePairsFinder (IMP::core)

NonWaterNonHydrogenPDBSelector (IMP::atom)

RMSDCalculator (IMP::atom)

VectorInputD (IMP::algebra)

ConjugateGradients (IMP::core)

GridD (IMP::algebra)

NonWaterPDBSelector (IMP::atom)

RMSDClustering (IMP::multifit)

VectorInputD< 1 > (IMP::algebra)

ConjugateGradients (IMP::gsl)

GridIndexD (IMP::algebra)

NormalizedSphereDistancePairScore (IMP::core)

RotamerAngleTuple (IMP::rotamer)

VectorKDMetric (IMP::algebra)

ConnectingPairContainer (IMP::container)

GridStates (IMP::em2d)

NormalMover (IMP::core)

RotamerCalculator (IMP::rotamer)

VelocityScalingOptimizerState (IMP::atom)

ConnectivityRestraint (IMP::core)

GSLOptimizer (IMP::gsl)

NotPDBSelector (IMP::atom)

RotamerLibrary (IMP::rotamer)

VersionInfo (IMP::base)

ConsecutivePairContainer (IMP::container)

H

NPDBSelector (IMP::atom)

Rotation2D (IMP::algebra)

VolumeRestraint (IMP::core)

ConsecutivePairFilter (IMP::container)

Nuisance (IMP::isd)

Rotation3D (IMP::algebra)

vonMises (IMP::isd)

ConstantPairPredicate (IMP::core)

Harmonic (IMP::score_functor)

O

RunInTempDir (IMP.test)

vonMisesKappaConjugateRestraint (IMP::isd)

ConstantQuadPredicate (IMP::core)

Harmonic (IMP::core)

S

vonMisesKappaJeffreysRestraint (IMP::isd)

ConstantRestraint (IMP::core)

HarmonicDistancePairScore (IMP::core)

Object (IMP::base)

vonMisesSufficient (IMP::isd)

ConstantSingletonPredicate (IMP::core)

HarmonicLowerBound (IMP::score_functor)

OpenCubicSpline (IMP::core)

SameResiduePairFilter (IMP::atom)

Voxel (IMP::em)

ConstantTripletPredicate (IMP::core)

HarmonicLowerBound (IMP::core)

OpenCubicSpline (IMP::score_functor)

SampleAssignmentContainer (IMP::domino)

W

Constraint (IMP::kernel)

HarmonicSphereDistancePairScore (IMP::core)

Optimizer (IMP::kernel)

SampledDensityMap (IMP::em)

ConstVector (IMP::base)

HarmonicUpperBound (IMP::score_functor)

OptimizerState (IMP::kernel)

Sampler (IMP::kernel)

WarningContext (IMP::base)

Container (IMP::kernel)

HarmonicUpperBound (IMP::core)

OptionParser (IMP.kernel)

SaveLink (IMP::rmf)

WaterPDBSelector (IMP::atom)

Context (IMP.parallel)

HarmonicUpperBoundSphereDiameterPairScore (IMP::core)

Order (IMP::domino)

SaveOptimizerState (IMP::rmf)

WeakPointer (IMP::base)

Copy (IMP::atom)

HarmonicUpperBoundSphereDistancePairScore (IMP::core)

OrderedTypePairPredicate (IMP::core)

Scale (IMP::isd)

WeightedExcludedVolumeRestraint (IMP::multifit)

Cosine (IMP::core)

HarmonicWell (IMP::core)

OrderedTypeQuadPredicate (IMP::core)

ScopedAddCacheAttribute (IMP::kernel)

WeightedSphereDistancePairScore (IMP::core)

CoulombPairScore (IMP::atom)

HasHigherCCC (IMP::em2d)

OrderedTypeSingletonPredicate (IMP::core)

ScopedSetAttribute (IMP::kernel)

WeightScore (IMP::score_functor)

Covariance1DFunction (IMP::isd)

HasLowerScore (IMP::em2d)

OrderedTypeTripletPredicate (IMP::core)

Score (IMP::score_functor)

WormLikeChain (IMP::misc)

Cover (IMP::core)

HeapAssignmentContainer (IMP::domino)

OrPDBSelector (IMP::atom)

ScoreAccumulator (IMP::kernel)

WriteAssignmentContainer (IMP::domino)

CoverBond (IMP::atom)

HeapRecord (IMP.em2d.solutions_io)

OwnerPointer (IMP::base)

ScoreFunction (IMP::em2d)

WriteHDF5AssignmentContainer (IMP::domino)

CoverRefined (IMP::core)

HierarchiesGeometry (IMP::atom)

P

ScoreState (IMP::kernel)

WriteOptimizerState (IMP::display)

CPDBSelector (IMP::atom)

Hierarchy (IMP::atom)

ScoreUnaryFunction (IMP::score_functor)

WritePDBOptimizerState (IMP::atom)

CreateLogContext (IMP::base)

Hierarchy (IMP::core)

PackedAssignmentContainer (IMP::domino)

ScoringFunction (IMP::kernel)

Writer (IMP::display)

CustomXYZR (IMP::misc)

HierarchyCounter (IMP::core)

PairConstraint (IMP::core)

ScoringFunctionAdaptor (IMP::kernel)

WriterAdaptor (IMP::display)

CvEstimator (IMP.isd.TuneRex)

HierarchyGeometry (IMP::atom)

PairContainer (IMP::kernel)

SecondaryStructureResidue (IMP::atom)

WriteRestraintScoresOptimizerState (IMP::core)

Cylinder3D (IMP::algebra)

HierarchyTraits (IMP::core)

PairContainerAdaptor (IMP::kernel)

Segment3D (IMP::algebra)

X

CylinderGeometry (IMP::display)

HierarchyVisitor (IMP::core)

PairContainerSet (IMP::container)

SegmentationParameters (IMP::em2d)

D

HighDensityEmbedding (IMP::em)

PairContainerStatistics (IMP::container)

SegmentGeometry (IMP::display)

Xlink (IMP.em2d.buildxlinks)

Histogram (IMP::statistics)

PairGeometry (IMP::display)

Selection (IMP::atom)

XlinksDict (IMP.em2d.buildxlinks)

Database2 (IMP.em2d.Database)

HistogramD (IMP::statistics)

PairListSubsetFilterTable (IMP::domino)

SelectionGeometry (IMP::atom)

XMLDisplay (IMP.restrainer)

DataObject (IMP::core)

History (IMP.isd.History)

PairModifier (IMP::kernel)

SerialMover (IMP::core)

XMLRepresentation (IMP.restrainer)

DataPointsAssignment (IMP::multifit)

HybridMonteCarlo (IMP::isd)

PairPredicate (IMP::kernel)

Server (IMP.isd.AbstractGrid)

XMLRestraint (IMP.restrainer)

DecayPairContainerOptimizerState (IMP::misc)

HydrogenPDBSelector (IMP::atom)

PairRestraint (IMP::core)

set (IMP::base)

XYZ (IMP::core)

Decorator (IMP::kernel)

I

PairsConstraint (IMP::container)

SetCheckState (IMP::base)

XYZDerivativeGeometry (IMP::core)

DefaultEmbeddingD (IMP::algebra)

PairScore (IMP::kernel)

SetLogState (IMP::base)

XYZDerivativesGeometry (IMP::core)

DeltaDistributionFunction (IMP::saxs)

Image (IMP::em2d)

PairsGeometry (IMP::display)

SetLogTarget (IMP::base)

XYZR (IMP::core)

DenseGrid3D (IMP::algebra)

ImageHeader (IMP::em)

PairsOptimizerState (IMP::container)

SetNumberOfThreads (IMP::base)

XYZRGeometry (IMP::core)

DenseGridStorageD (IMP::algebra)

IMPRestraints (IMP.modeller)

PairsRestraint (IMP::container)

SettingsData (IMP::multifit)

XYZRsGeometry (IMP::core)

DensityDataPoints (IMP::multifit)

ImproperSingletonScore (IMP::atom)

ParabolicFit2D (IMP::algebra)

sfo_common (IMP.isd.shared_functions)

XYZStates (IMP::domino)

DensityFillingRestraint (IMP::em)

InBoundingBox3DSingletonPredicate (IMP::core)

Particle (IMP::kernel)

SGEPESlaveArray (IMP.parallel)

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