Class that produces analysis-related output, and is able to parse the output of a file produced by the Statistics class. More...
Public Member Functions | |
| def | add_data |
| adds data point to hierarchy | |
| def | create_entry |
| adds a new entry to the hierarchy by parsing a title entry | |
| def | dump |
| "dump float data from history h to file dest. More... | |
| def | histogram |
| plots histogram of datum (cat,name) from hierarchy h, optionnally specifying a range. More... | |
| def | plot |
| plots datum (cat,name) from hierarchy h, optionnally specifying a range. More... | |
| def | read_AMBER_stats |
| reads an AMBER mden file and returns a History instance | |
| def | read_AMBER_variables |
| reads an AMBER mden file and returns variables present in it | |
| def | read_stats |
| reads a *_stats.txt file and returns a History instance | |
| def | read_variables |
| reads a *_stats.txt file and returns variables present in it | |
Detailed Description
- Note
- This class is only available in Python.
Definition at line 5 of file Analysis.py.
Member Function Documentation
| def IMP.isd.Analysis.Analysis.dump | ( | self, | |
| h, | |||
| dest, | |||
| args | |||
| ) |
args can be either strings corresponding to categories, or tuples corresponding to entries of a certain category. Only one counter will be output for the whole dump, it corresponds to the counter of the first entry's category. You can always specify additional counters if needed.
Definition at line 47 of file Analysis.py.
Here is the call graph for this function:| def IMP.isd.Analysis.Analysis.histogram | ( | self, | |
| h, | |||
| datums, | |||
| kwargs | |||
| ) |
To plot multiple data at the same time, add them sequentially.
Definition at line 39 of file Analysis.py.
| def IMP.isd.Analysis.Analysis.plot | ( | self, | |
| h, | |||
| datums, | |||
| kwargs | |||
| ) |
To plot multiple data at the same time, add them sequentially. Takes x axis from the 'step' entry of the first datum. TODO.
Definition at line 33 of file Analysis.py.
Here is the call graph for this function:The documentation for this class was generated from the following file: