IMP  2.0.1
The Integrative Modeling Platform
IMP::statistics::ConfigurationSetRMSDMetric Class Reference

#include <IMP/statistics/metrics.h>

+ Inheritance diagram for IMP::statistics::ConfigurationSetRMSDMetric:

Public Member Functions

 ConfigurationSetRMSDMetric (ConfigurationSet *cs, SingletonContainer *sc, bool align=false)
 
virtual void do_show (std::ostream &out) const
 
double get_distance (unsigned int i, unsigned int j) const
 
unsigned int get_number_of_items () const
 

Additional Inherited Members

- Protected Member Functions inherited from IMP::statistics::Metric
 Metric (std::string name)
 

Detailed Description

Compute the RMSD between specified sets of particles in pairs of configurations, within a configuration set

Definition at line 33 of file metrics.h.

Constructor & Destructor Documentation

IMP::statistics::ConfigurationSetRMSDMetric::ConfigurationSetRMSDMetric ( ConfigurationSet cs,
SingletonContainer sc,
bool  align = false 
)

Constructor for creating a metric that computes RMSD between pairs of configurations in a configuration set, using joint particles specified in a singleton continer

Parameters
csthe set of configurations
scthe particles used for RMSD calculation between each pair of configuration
alignwhether to align pair of configurations prior to RMSD calculations

The documentation for this class was generated from the following file: