IMP::container::PairContainerSet Class Reference
Stores a set of PairContainers. More...
#include <IMP/container/PairContainerSet.h>
Inheritance diagram for IMP::container::PairContainerSet:Public Member Functions | |
| PairContainerSet (Model *m, std::string name="PairContainerSet %1%") | |
| Construct and empty set. | |
| PairContainerSet (const PairContainersTemp &pc, std::string name="PairContainerSet %1%") | |
| template<class M > | |
| void | apply_generic (const M *m) const |
| apply modifer sm to all pair containers | |
| virtual void | do_show (std::ostream &out) const |
| ParticleIndexes | get_all_possible_indexes () const |
| Get contained particles. More... | |
| Public Member Functions inherited from IMP::kernel::PairContainer | |
| void | apply (const PairModifier *sm) const |
| Apply a SingletonModifier to the contents. | |
| void | apply_generic (const PairModifier *m) const |
| Just use apply() in the base class. | |
| bool | get_contains_particle_pair (ParticlePair v) const |
| This function is very slow and you should think hard about using it. More... | |
| virtual ParticleIndexPairs | get_indexes () const =0 |
| unsigned int | get_number_of_particle_pairs () const |
| ParticlePair | get_particle_pair (unsigned int i) const |
| ParticlePairsTemp | get_particle_pairs () const |
| virtual ParticleIndexPairs | get_range_indexes () const =0 |
| Public Member Functions inherited from IMP::kernel::Container | |
| virtual void | do_after_evaluate (DerivativeAccumulator *accpt) |
| Reset changed status. | |
| ModelObjectsTemp | do_get_outputs () const |
| containers don't have outputs | |
| ParticlesTemp | get_all_possible_particles () const |
| bool | get_is_changed () const |
| virtual bool | get_is_decomposable () const |
| Public Member Functions inherited from IMP::kernel::ScoreState | |
| ScoreState (Model *m, std::string name="ScoreState %1%") | |
| void | after_evaluate (DerivativeAccumulator *accpt) |
| Do post evaluation work if needed. | |
| void | before_evaluate () |
| Force update of the structure. | |
| ContainersTemp | get_input_containers () const |
| ParticlesTemp | get_input_particles () const |
| ContainersTemp | get_output_containers () const |
| ParticlesTemp | get_output_particles () const |
| Public Member Functions inherited from IMP::kernel::ModelObject | |
| ModelObject (Model *m, std::string name) | |
| ModelObjectsTemp | get_inputs () const |
| ModelObjectsTemps | get_interactions () const |
| Model * | get_model () const |
| ModelObjectsTemp | get_outputs () const |
| Public Member Functions inherited from IMP::base::Object | |
| virtual void | clear_caches () |
| virtual IMP::base::VersionInfo | get_version_info () const =0 |
| Get information about the module and version of the object. | |
| void | set_check_level (CheckLevel l) |
| void | set_log_level (LogLevel l) |
| Set the logging level used in this object. More... | |
| void | set_was_used (bool tf) const |
| void | show (std::ostream &out=std::cout) const |
| const std::string & | get_name () const |
| void | set_name (std::string name) |
Methods to control the nested container | |
This container merges a set of nested containers. To add or remove nested containers, use the methods below. | |
| void | remove_pair_container (PairContainer *d) |
| void | remove_pair_containers (const PairContainers &d) |
| void | set_pair_containers (const PairContainers &ps) |
| void | set_pair_containers_order (const PairContainers &objs) |
| unsigned int | add_pair_container (PairContainer *obj) |
| void | add_pair_containers (const PairContainers &objs) |
| void | clear_pair_containers () |
| unsigned int | get_number_of_pair_containers () const |
| bool | get_has_pair_containers () |
| PairContainer * | get_pair_container (unsigned int i) const |
| PairContainers | get_pair_containers () const |
| void | reserve_pair_containers (unsigned int sz) |
Additional Inherited Members | |
| Public Types inherited from IMP::kernel::PairContainer | |
| typedef ParticleIndexPair | ContainedIndexType |
| typedef ParticleIndexPairs | ContainedIndexTypes |
| typedef ParticlePair | ContainedType |
| typedef ParticlePairsTemp | ContainedTypes |
| Protected Member Functions inherited from IMP::kernel::PairContainer | |
| PairContainer (Model *m, std::string name="PairContainer %1%") | |
| virtual void | do_apply (const PairModifier *sm) const =0 |
| virtual bool | do_get_provides_access () const |
| Related Functions inherited from IMP::kernel::PairContainer | |
| typedef IMP::base::Vector < IMP::base::WeakPointer < PairContainer > > | PairContainersTemp |
Detailed Description
The input sets must be disjoint. This can change if there is demand for it.
- Note
- The maintenance of the invariant is done by an associated IMP::Constraint. As a result, the state is only guaranteed to be correct either during model evaluation, or immediately following model evaluation before any particles have been changed.
Definition at line 28 of file PairContainerSet.h.
Member Function Documentation
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virtual |
Get a list of all particles contained in this one, given that the input containers are up to date.
Implements IMP::kernel::Container.
The documentation for this class was generated from the following file: