IMP::domino::BranchAndBoundSampler Class Reference
Sample best solutions using BranchAndBound. More...
#include <IMP/domino/BranchAndBoundSampler.h>
Inheritance diagram for IMP::domino::BranchAndBoundSampler:Public Member Functions | |
| BranchAndBoundSampler (Model *m, std::string name="BranchAndBoundSampler %1%") | |
| BranchAndBoundSampler (Model *m, ParticleStatesTable *pst, std::string name="BranchAndBoundSampler %1%") | |
| virtual void | do_show (std::ostream &out) const |
| Public Member Functions inherited from IMP::domino::DiscreteSampler | |
| DiscreteSampler (Model *m, ParticleStatesTable *pst, std::string name) | |
| unsigned int | get_maximum_number_of_assignments () const |
| Assignments | get_sample_assignments (const Subset &s) const |
| void | set_maximum_number_of_assignments (unsigned int mx) |
| void | set_particle_states (Particle *p, ParticleStates *se) |
| void | set_particle_states_table (ParticleStatesTable *cse) |
| void | set_assignments_table (AssignmentsTable *sst) |
| ParticleStatesTable * | get_particle_states_table () const |
| void | remove_subset_filter_table (SubsetFilterTable *d) |
| void | remove_subset_filter_tables (const SubsetFilterTables &d) |
| void | set_subset_filter_tables (const SubsetFilterTables &ps) |
| void | set_subset_filter_tables_order (const SubsetFilterTables &objs) |
| unsigned int | add_subset_filter_table (SubsetFilterTable *obj) |
| void | add_subset_filter_tables (const SubsetFilterTables &objs) |
| void | clear_subset_filter_tables () |
| unsigned int | get_number_of_subset_filter_tables () const |
| bool | get_has_subset_filter_tables () |
| SubsetFilterTable * | get_subset_filter_table (unsigned int i) const |
| SubsetFilterTables | get_subset_filter_tables () const |
| void | reserve_subset_filter_tables (unsigned int sz) |
| Public Member Functions inherited from IMP::kernel::Sampler | |
| Sampler (Model *m, std::string name="Sampler %1%") | |
| ConfigurationSet * | create_sample () const |
| Model * | get_model () const |
| ScoringFunction * | get_scoring_function () const |
| void | set_scoring_function (ScoringFunctionAdaptor sf) |
| Public Member Functions inherited from IMP::base::Object | |
| virtual void | clear_caches () |
| virtual IMP::base::VersionInfo | get_version_info () const =0 |
| Get information about the module and version of the object. | |
| void | set_check_level (CheckLevel l) |
| void | set_log_level (LogLevel l) |
| Set the logging level used in this object. More... | |
| void | set_was_used (bool tf) const |
| void | show (std::ostream &out=std::cout) const |
| const std::string & | get_name () const |
| void | set_name (std::string name) |
Related Functions | |
(Note that these are not member functions.) | |
| typedef IMP::base::Vector < IMP::base::WeakPointer < BranchAndBoundSampler > > | BranchAndBoundSamplersTemp |
| Related Functions inherited from IMP::domino::DiscreteSampler | |
| typedef IMP::base::Vector < IMP::base::WeakPointer < DiscreteSampler > > | DiscreteSamplersTemp |
| Related Functions inherited from IMP::kernel::Sampler | |
| typedef IMP::base::Vector < IMP::base::WeakPointer < Sampler > > | SamplersTemp |
| Related Functions inherited from IMP::base::Object | |
| typedef IMP::base::Vector < IMP::base::WeakPointer < Object > > | ObjectsTemp |
Additional Inherited Members | |
| Protected Member Functions inherited from IMP::domino::DiscreteSampler | |
| virtual Assignments | do_get_sample_assignments (const Subset &all) const =0 |
| virtual ConfigurationSet * | do_sample () const |
| AssignmentsTable * | get_assignments_table_to_use (const SubsetFilterTables &sfts, unsigned int max=std::numeric_limits< int >::max()) const |
| SubsetFilterTables | get_subset_filter_tables_to_use (const RestraintsTemp &rs, ParticleStatesTable *pst) const |
Detailed Description
Find all good configurations of the model using branch and bound. Searches are truncated when the score is worse than the the thresholds in the Sampler or when two particles with the same ParticlesState are assigned the same state.
Definition at line 29 of file BranchAndBoundSampler.h.
Friends And Related Function Documentation
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related |
Pass a set of objects.
Definition at line 39 of file BranchAndBoundSampler.h.
The documentation for this class was generated from the following file: