IMP  2.0.1
The Integrative Modeling Platform
IMP::core::GridClosePairsFinder Class Reference

Find all nearby pairs by testing all pairs. More...

#include <IMP/core/GridClosePairsFinder.h>

+ Inheritance diagram for IMP::core::GridClosePairsFinder:

Public Member Functions

ParticleIndexPairs get_close_pairs (Model *m, const ParticleIndexes &pc) const
 
ParticleIndexPairs get_close_pairs (Model *m, const ParticleIndexes &pca, const ParticleIndexes &pcb) const
 
- Public Member Functions inherited from IMP::core::ClosePairsFinder
 ClosePairsFinder (std::string name)
 
ContainersTemp get_input_containers (const ParticlesTemp &ps) const
 
ContainersTemp get_input_containers (Particle *p) const
 
ParticlesTemp get_input_particles (const ParticlesTemp &ps) const
 
ParticlesTemp get_input_particles (Particle *p) const
 
ModelObjectsTemp get_inputs (Model *m, const ParticleIndexes &pis) const
 
virtual ParticlePairsTemp get_close_pairs (const ParticlesTemp &pc) const =0
 
virtual ParticlePairsTemp get_close_pairs (const ParticlesTemp &pca, const ParticlesTemp &pcb) const =0
 
virtual IntPairs get_close_pairs (const algebra::BoundingBox3Ds &bbs) const =0
 
virtual IntPairs get_close_pairs (const algebra::BoundingBox3Ds &bas, const algebra::BoundingBox3Ds &bbs) const =0
 
virtual void set_distance (double d)
 
double get_distance () const
 
void remove_pair_filter (PairPredicate *d)
 
void remove_pair_filters (const PairPredicates &d)
 
void set_pair_filters (const PairPredicates &ps)
 
void set_pair_filters_order (const PairPredicates &objs)
 
unsigned int add_pair_filter (PairPredicate *obj)
 
void add_pair_filters (const PairPredicates &objs)
 
void clear_pair_filters ()
 
unsigned int get_number_of_pair_filters () const
 
bool get_has_pair_filters ()
 
PairPredicateget_pair_filter (unsigned int i) const
 
PairPredicates get_pair_filters () const
 
void reserve_pair_filters (unsigned int sz)
 
- Public Member Functions inherited from IMP::base::Object
virtual void clear_caches ()
 
virtual IMP::base::VersionInfo get_version_info () const =0
 Get information about the module and version of the object.
 
void set_check_level (CheckLevel l)
 
void set_log_level (LogLevel l)
 Set the logging level used in this object. More...
 
void set_was_used (bool tf) const
 
void show (std::ostream &out=std::cout) const
 
const std::string & get_name () const
 
void set_name (std::string name)
 

Additional Inherited Members

- Protected Member Functions inherited from IMP::core::ClosePairsFinder
virtual ModelObjectsTemp do_get_inputs (Model *m, const ParticleIndexes &pis) const =0
 

Detailed Description

See Also
CloserPairsScoreState

Definition at line 21 of file GridClosePairsFinder.h.


The documentation for this class was generated from the following file: