IMP
2.0.1
The Integrative Modeling Platform
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Find all nearby pairs by testing all pairs. More...
#include <IMP/core/GridClosePairsFinder.h>
Public Member Functions | |
ParticleIndexPairs | get_close_pairs (Model *m, const ParticleIndexes &pc) const |
ParticleIndexPairs | get_close_pairs (Model *m, const ParticleIndexes &pca, const ParticleIndexes &pcb) const |
Public Member Functions inherited from IMP::core::ClosePairsFinder | |
ClosePairsFinder (std::string name) | |
ContainersTemp | get_input_containers (const ParticlesTemp &ps) const |
ContainersTemp | get_input_containers (Particle *p) const |
ParticlesTemp | get_input_particles (const ParticlesTemp &ps) const |
ParticlesTemp | get_input_particles (Particle *p) const |
ModelObjectsTemp | get_inputs (Model *m, const ParticleIndexes &pis) const |
virtual ParticlePairsTemp | get_close_pairs (const ParticlesTemp &pc) const =0 |
virtual ParticlePairsTemp | get_close_pairs (const ParticlesTemp &pca, const ParticlesTemp &pcb) const =0 |
virtual IntPairs | get_close_pairs (const algebra::BoundingBox3Ds &bbs) const =0 |
virtual IntPairs | get_close_pairs (const algebra::BoundingBox3Ds &bas, const algebra::BoundingBox3Ds &bbs) const =0 |
virtual void | set_distance (double d) |
double | get_distance () const |
void | remove_pair_filter (PairPredicate *d) |
void | remove_pair_filters (const PairPredicates &d) |
void | set_pair_filters (const PairPredicates &ps) |
void | set_pair_filters_order (const PairPredicates &objs) |
unsigned int | add_pair_filter (PairPredicate *obj) |
void | add_pair_filters (const PairPredicates &objs) |
void | clear_pair_filters () |
unsigned int | get_number_of_pair_filters () const |
bool | get_has_pair_filters () |
PairPredicate * | get_pair_filter (unsigned int i) const |
PairPredicates | get_pair_filters () const |
void | reserve_pair_filters (unsigned int sz) |
Public Member Functions inherited from IMP::base::Object | |
virtual void | clear_caches () |
virtual IMP::base::VersionInfo | get_version_info () const =0 |
Get information about the module and version of the object. | |
void | set_check_level (CheckLevel l) |
void | set_log_level (LogLevel l) |
Set the logging level used in this object. More... | |
void | set_was_used (bool tf) const |
void | show (std::ostream &out=std::cout) const |
const std::string & | get_name () const |
void | set_name (std::string name) |
Additional Inherited Members | |
Protected Member Functions inherited from IMP::core::ClosePairsFinder | |
virtual ModelObjectsTemp | do_get_inputs (Model *m, const ParticleIndexes &pis) const =0 |
Related Functions inherited from IMP::base::Object | |
typedef IMP::base::Vector < IMP::base::WeakPointer < Object > > | ObjectsTemp |
Definition at line 21 of file GridClosePairsFinder.h.