A decorator for wrapping a particle representing a molecular bond. More...

Inheritance diagram for IMP::atom::Bond:

Public Types
enum	Type { UNKNOWN =-1, NONBIOLOGICAL, SINGLE =1, DOUBLE =2, TRIPLE =3, HYDROGEN, SALT, PEPTIDE, AMIDE, AROMATIC }
	The types a bond can have right now.

Public Member Functions
	Bond (Model *m, ParticleIndex id)

	Bond (::IMP::kernel::Particle *p)

Bonded	get_bonded (unsigned int i) const
	Get the atom i of the bond. More...

Float	get_length () const

Int	get_order () const

Float	get_stiffness () const

Int	get_type () const

void	set_length (Float t)

void	set_order (Int t)

void	set_stiffness (Float t)

void	set_type (Int t)

void	show (std::ostream &out=std::cout) const

Public Member Functions inherited from IMP::kernel::Decorator
ParticleIndex	get_particle_index () const

Particle *	get_particle () const

Model *	get_model () const
	Returns the Model containing the particle.

	Decorator (Particle *p)

	Decorator ()

Static Public Member Functions
static Bond	decorate_particle (::IMP::kernel::Particle *p)

static FloatKey	get_length_key ()

static bool	particle_is_instance (Particle *p)
	Return true if the particle is a bond.

Static Public Member Functions inherited from IMP::kernel::Decorator
static bool	particle_is_instance (Particle *p)
	Return true if the particle can be cast to the decorator. More...

Related Functions
(Note that these are not member functions.)
Bonds	get_internal_bonds (Hierarchy mhd)
	Get the bonds internal to this tree. More...

Additional Inherited Members
Protected Member Functions inherited from IMP::kernel::Decorator
	Decorator (Model *m, ParticleIndex pi)

	Decorator (Particle *p)

Detailed Description

As with Atom, the types of bonds will eventually be run-time expandible.

Definition at line 40 of file bond_decorators.h.

Member Function Documentation

Bonded IMP::atom::Bond::get_bonded ( unsigned int i ) const

Parameters

[in] i 0 or 1

Definition at line 208 of file bond_decorators.h.

Bonds get_internal_bonds ( Hierarchy mhd )

The documentation for this class was generated from the following files: