IMP::display::ChimeraWriter Class Reference
Write geometry to a python file for Chimera to read. More...
#include <IMP/display/ChimeraWriter.h>
Inheritance diagram for IMP::display::ChimeraWriter:Public Member Functions | |
| ChimeraWriter (base::TextOutput of) | |
| ChimeraWriter (const char *name) | |
| ChimeraWriter (std::string name) | |
| Public Member Functions inherited from IMP::display::TextWriter | |
| TextWriter (base::TextOutput fn) | |
| Create a writer opening the file with the passed sink. More... | |
| TextWriter (std::string name) | |
| Create a write for a file or files with the passed name or pattern. More... | |
| virtual | ~TextWriter () |
| Write the data and close the file. | |
| std::string | get_current_file_name () const |
| get the name of the current file being writter | |
| Public Member Functions inherited from IMP::display::Writer | |
| Writer (std::string name) | |
| Create a writer opening the file with the passed name. | |
| virtual | ~Writer () |
| Write the data and close the file. | |
| void | set_frame (unsigned int i) |
| int | get_frame () const |
| void | add_geometry (Geometry *g) |
| void | add_geometry (const Geometries &g) |
| Public Member Functions inherited from IMP::base::Object | |
| virtual void | clear_caches () |
| virtual IMP::base::VersionInfo | get_version_info () const =0 |
| Get information about the module and version of the object. | |
| void | set_check_level (CheckLevel l) |
| void | set_log_level (LogLevel l) |
| Set the logging level used in this object. More... | |
| void | set_was_used (bool tf) const |
| void | show (std::ostream &out=std::cout) const |
| const std::string & | get_name () const |
| void | set_name (std::string name) |
Protected Member Functions | |
| void | add_python_code (std::string code) |
| Add some arbitrary python code to the chimera file. More... | |
| Protected Member Functions inherited from IMP::display::TextWriter | |
| void | do_set_frame () |
| in case you want to take action on a new frame | |
| std::ostream & | get_stream () |
| Get the stream for inhereting classes to write to. | |
| void | open () |
| Protected Member Functions inherited from IMP::display::Writer | |
| virtual void | do_close ()=0 |
| A hook for implementation classes to use to take actions on file close. | |
| virtual void | do_open ()=0 |
| A hook for implementation classes to use to take actions on file open. | |
| Protected Member Functions inherited from IMP::display::GeometryProcessor | |
| virtual bool | handle_anything (Geometry *, Color, std::string) |
| virtual bool | handle_bounding_box (BoundingBoxGeometry *, Color, std::string) |
| void | handle_geometry (Geometry *g) |
| virtual bool | handle_label (LabelGeometry *, Color, std::string) |
| virtual bool | handle_surface_mesh (SurfaceMeshGeometry *, Color, std::string) |
| Protected Member Functions inherited from IMP::base::Object | |
| Object (std::string name) | |
| Construct an object with the given name. More... | |
Additional Inherited Members | |
| Related Functions inherited from IMP::display::TextWriter | |
| typedef IMP::base::Vector < IMP::base::WeakPointer < TextWriter > > | TextWritersTemp |
Detailed Description
The writer writes a python file which can handle markers, edges and surfaces. Since these are native chimera objects, they are handled a bit better than vrml ones.
This format creates one file per frame. So if you want to use frames and save them all, make sure there is a "%1%" in the file name string passed to the constructor.
- Deprecated:
- Use IMP::rmf instead when interfacing with Chimera.
Definition at line 28 of file ChimeraWriter.h.
Member Function Documentation
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protected |
You should import the bits of Chimera that you need. At the moment, you should not name a variable surf_sets or marker_sets.
The documentation for this class was generated from the following file: