IMP
2.0.1
The Integrative Modeling Platform
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The type of an atom. More...
#include <IMP/atom/Atom.h>
Related Functions | |
(Note that these are not member functions.) | |
AtomType | add_atom_type (std::string name, Element e) |
Create a new AtomType. More... | |
const AtomType | AT_CA |
const AtomType | AT_N |
const AtomType | AT_UNKNOWN |
The standard Atom names in IMP are derived from the PDB names as follows:
We provide an AtomType instance for each of the standard PDB atom types. These have names such as IMP::atom::AT_N. The full list is elided for readability.
An AtomType implies an element (and hence a mass). While we have the associations set up for protein, DNA and RNA atoms, it may be necessary to add them for hetero atoms. You can use the add_atom_type() function to do this.
All atoms have the mass stored internally using a Mass decorator.
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Definition at line 62 of file atom/Atom.h.
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Definition at line 60 of file atom/Atom.h.
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Definition at line 58 of file atom/Atom.h.