Simple connectivity restraint. More...

Public Member Functions
core::HarmonicUpperBound *	get_harmonic_upper_bound ()

core::ConnectivityRestraint *	get_restraint ()

core::SphereDistancePairScore *	get_sphere_distance_pair_score ()

VersionInfo	get_version_info () const

void	set_k (Float k)
	Set the spring constant for the HarmonicUpperBound. More...

void	set_mean (Float mean)
	Set the mean for the HarmonicUpperBound. More...

void	set_standard_deviation (Float sd)
	Set the standard deviation for the HarmonicUpperBound.

void	show (std::ostream &out=std::cout) const

Friends
SimpleConnectivity	create_simple_connectivity_on_molecules (atom::Hierarchies const &mhs)

SimpleConnectivity	create_simple_connectivity_on_rigid_bodies (const core::RigidBodies &rbs, Refiner *ref)

Related Functions
(Note that these are not member functions.)
SimpleConnectivity	create_simple_connectivity_on_molecules (const atom::Hierarchies &mhs)

Detailed Description

Note: SimpleConnectivity stores pointers to ConnectivityRestraint, HarmonicUpperBound, and SphereDistancePairScore.; It provides convenient methods to change mean, k, and standard deviation.

Definition at line 139 of file simplify_restraint.h.

Member Function Documentation

void IMP::restrainer::SimpleConnectivity::set_k ( Float k )

The default k is 1.

Definition at line 183 of file simplify_restraint.h.

void IMP::restrainer::SimpleConnectivity::set_mean ( Float mean )

The default mean is 0.

Definition at line 168 of file simplify_restraint.h.

SimpleConnectivity create_simple_connectivity_on_molecules ( const atom::Hierarchies & mhs )

See Also: LowestRefinedPairScore; SphereDistancePairScore; HarmonicUpperBound; LeavesRefiner

The documentation for this class was generated from the following file: