IMP  2.0.1
The Integrative Modeling Platform
IMP::statistics::PartitionalClusteringWithCenter Class Reference

#include <IMP/statistics/PartitionalClusteringWithCenter.h>

+ Inheritance diagram for IMP::statistics::PartitionalClusteringWithCenter:

Public Member Functions

virtual void do_show (std::ostream &out) const
 
const Intsget_cluster (unsigned int i) const
 
const algebra::VectorKDget_cluster_center (unsigned int i) const
 
int get_cluster_representative (unsigned int i) const
 
unsigned int get_number_of_clusters () const
 
- Public Member Functions inherited from IMP::statistics::PartitionalClustering
 PartitionalClustering (std::string name)
 
- Public Member Functions inherited from IMP::base::Object
virtual void clear_caches ()
 
virtual IMP::base::VersionInfo get_version_info () const =0
 Get information about the module and version of the object.
 
void set_check_level (CheckLevel l)
 
void set_log_level (LogLevel l)
 Set the logging level used in this object. More...
 
void set_was_used (bool tf) const
 
void show (std::ostream &out=std::cout) const
 
const std::string & get_name () const
 
void set_name (std::string name)
 

Additional Inherited Members

- Protected Member Functions inherited from IMP::base::Object
 Object (std::string name)
 Construct an object with the given name. More...
 

Detailed Description

In addition to the information in the Clustering base class, PartitionalClusteringWithCenter stores a cluster center for each cluster. The cluster center is a point in the space defined by the embedding.

The representative for each cluster is the member whose location in the embedding is closest to the cluster center.

Definition at line 26 of file PartitionalClusteringWithCenter.h.

Member Function Documentation

const Ints& IMP::statistics::PartitionalClusteringWithCenter::get_cluster ( unsigned int  cluster_index) const
virtual

Return the list of indexes in the ith cluster.

Implements IMP::statistics::PartitionalClustering.

int IMP::statistics::PartitionalClusteringWithCenter::get_cluster_representative ( unsigned int  cluster_index) const
virtual

Return the index of an item that "typifies" the ith cluster.

Implements IMP::statistics::PartitionalClustering.


The documentation for this class was generated from the following file: