IMP  2.0.1
The Integrative Modeling Platform
IMP::statistics::Embedding Class Referenceabstract

Store data to be clustered for embedding based algorithms. More...

#include <IMP/statistics/Embedding.h>

+ Inheritance diagram for IMP::statistics::Embedding:

Public Member Functions

virtual unsigned int get_number_of_items () const =0
 
virtual algebra::VectorKD get_point (unsigned int i) const =0
 
virtual algebra::VectorKDs get_points () const =0
 
- Public Member Functions inherited from IMP::base::Object
virtual void clear_caches ()
 
virtual IMP::base::VersionInfo get_version_info () const =0
 Get information about the module and version of the object.
 
void set_check_level (CheckLevel l)
 
void set_log_level (LogLevel l)
 Set the logging level used in this object. More...
 
void set_was_used (bool tf) const
 
void show (std::ostream &out=std::cout) const
 
const std::string & get_name () const
 
void set_name (std::string name)
 

Protected Member Functions

 Embedding (std::string name)
 
- Protected Member Functions inherited from IMP::base::Object
 Object (std::string name)
 Construct an object with the given name. More...
 

Related Functions

(Note that these are not member functions.)

typedef IMP::base::Vector
< IMP::base::WeakPointer
< Embedding > > 
EmbeddingsTemp
 

Detailed Description

Point-based clustering needs a way of embedding the data being clustered in space. Classes which implement Embedding provide a mapping between each item being clustered (named by an integer index) and a point in space, as a fixed-lenth array of floating point numbers.

Definition at line 25 of file statistics/embedding.h.

Friends And Related Function Documentation

Pass a set of objects.

Definition at line 34 of file statistics/embedding.h.


The documentation for this class was generated from the following file: