IMP
2.0.1
The Integrative Modeling Platform
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#include <IMP/atom/pdb.h>
Public Member Functions | |
WritePDBOptimizerState (const atom::Hierarchies &mh, std::string file_name) | |
void | set_period (unsigned int p) |
void | write (std::string file_name, unsigned int call=0, bool append=false) const |
Public Member Functions inherited from IMP::kernel::OptimizerState | |
OptimizerState (std::string name="OptimizerState %1%") | |
Optimizer * | get_optimizer () const |
virtual void | set_is_optimizing (bool) |
virtual void | update ()=0 |
Called when the Optimizer accepts a new conformation. | |
Public Member Functions inherited from IMP::base::Object | |
virtual void | clear_caches () |
virtual IMP::base::VersionInfo | get_version_info () const =0 |
Get information about the module and version of the object. | |
void | set_check_level (CheckLevel l) |
void | set_log_level (LogLevel l) |
Set the logging level used in this object. More... | |
void | set_was_used (bool tf) const |
void | show (std::ostream &out=std::cout) const |
const std::string & | get_name () const |
void | set_name (std::string name) |
Related Functions | |
(Note that these are not member functions.) | |
typedef IMP::base::Vector < IMP::base::WeakPointer < WritePDBOptimizerState > > | WritePDBOptimizerStatesTemp |
Related Functions inherited from IMP::kernel::OptimizerState | |
typedef IMP::base::Vector < IMP::base::WeakPointer < OptimizerState > > | OptimizerStatesTemp |
Related Functions inherited from IMP::base::Object | |
typedef IMP::base::Vector < IMP::base::WeakPointer < Object > > | ObjectsTemp |
Additional Inherited Members | |
Protected Member Functions inherited from IMP::base::Object | |
Object (std::string name) | |
Construct an object with the given name. More... | |
Protected Attributes inherited from IMP::kernel::OptimizerState | |
UncheckedWeakPointer< Optimizer > | optimizer_ |
This writes a PDB file at the specified interval during optimization. If the file name contains %1% then a new file is written each time with the %1% replaced by the index. Otherwise a new model is written each time to the same file.
IMP::atom::WritePDBOptimizerState::WritePDBOptimizerState | ( | const atom::Hierarchies & | mh, |
std::string | file_name | ||
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related |