  std::array< T > | STL class |
  RMF::Vector< D > | Represent a point in some dimension |
 RMF::Vector< 3U > | |
| RMF::BufferConstHandle | Manage a shared buffer for loading a RMF |
| RMF::BufferHandle | Manage a shared buffer for storing a RMF |
| RMF::HDF5::ConstAttributes< Base > | |
| RMF::CoordinateTransformer | Transform coordinates into the global reference frame |
| RMF::HDF5::DataSetAccessPropertiesD< TypeTraits, D > | |
| RMF::HDF5::DataSetCreationPropertiesD< TypeTraits, D > | |
| RMF::HDF5::DataSetIndexD< D > | |
| RMF::Decorator | The base class for decorators |
| RMF::decorator::AliasConst | |
| RMF::decorator::Alias | |
| RMF::decorator::AlternativesConst | |
| RMF::decorator::Alternatives | |
| RMF::decorator::AtomConst | |
| RMF::decorator::Atom | |
| RMF::decorator::BackwardsCompatibilityFragmentConst | |
| RMF::decorator::BackwardsCompatibilityFragment | |
| RMF::decorator::BallConst | |
| RMF::decorator::Ball | |
| RMF::decorator::BondConst | |
| RMF::decorator::Bond | |
| RMF::decorator::ChainConst | |
| RMF::decorator::Chain | |
| RMF::decorator::ClusterProvenanceConst | |
| RMF::decorator::ClusterProvenance | |
| RMF::decorator::ColoredConst | |
| RMF::decorator::Colored | |
| RMF::decorator::CombineProvenanceConst | |
| RMF::decorator::CombineProvenance | |
| RMF::decorator::CopyConst | |
| RMF::decorator::Copy | |
| RMF::decorator::CylinderConst | |
| RMF::decorator::Cylinder | |
| RMF::decorator::DiffuserConst | |
| RMF::decorator::Diffuser | |
| RMF::decorator::DomainConst | |
| RMF::decorator::Domain | |
| RMF::decorator::EllipsoidConst | |
| RMF::decorator::Ellipsoid | |
| RMF::decorator::ExplicitResolutionConst | |
| RMF::decorator::ExplicitResolution | |
| RMF::decorator::ExternalConst | |
| RMF::decorator::External | |
| RMF::decorator::FilterProvenanceConst | |
| RMF::decorator::FilterProvenance | |
| RMF::decorator::FragmentConst | |
| RMF::decorator::Fragment | |
| RMF::decorator::GaussianParticleConst | |
| RMF::decorator::GaussianParticle | |
| RMF::decorator::IntermediateParticleConst | |
| RMF::decorator::IntermediateParticle | |
| RMF::decorator::JournalArticleConst | |
| RMF::decorator::JournalArticle | |
| RMF::decorator::ParticleConst | |
| RMF::decorator::Particle | |
| RMF::decorator::ReferenceConst | |
| RMF::decorator::Reference | |
| RMF::decorator::ReferenceFrameConst | |
| RMF::decorator::ReferenceFrame | |
| RMF::decorator::RepresentationConst | |
| RMF::decorator::Representation | |
| RMF::decorator::ResidueConst | |
| RMF::decorator::Residue | |
| RMF::decorator::RigidParticleConst | |
| RMF::decorator::RigidParticle | |
| RMF::decorator::SampleProvenanceConst | |
| RMF::decorator::SampleProvenance | |
| RMF::decorator::ScaleConst | |
| RMF::decorator::Scale | |
| RMF::decorator::ScoreConst | |
| RMF::decorator::Score | |
| RMF::decorator::ScriptProvenanceConst | |
| RMF::decorator::ScriptProvenance | |
| RMF::decorator::SegmentConst | |
| RMF::decorator::Segment | |
| RMF::decorator::SoftwareProvenanceConst | |
| RMF::decorator::SoftwareProvenance | |
| RMF::decorator::StateConst | |
| RMF::decorator::State | |
| RMF::decorator::StructureProvenanceConst | |
| RMF::decorator::StructureProvenance | |
 RMF::decorator::TypedConst | |
 RMF::decorator::Typed | |
| RMF::Enum< TagT > | A strong enum with an associated string name for each value |
| std::exception | STL class |
| RMF::Exception | |
| RMF::IndexException | |
| RMF::InternalException | |
| RMF::IOException | |
| RMF::UsageException | |
| RMF::Factory | The base class for Factories |
| RMF::decorator::AliasFactory | |
| RMF::decorator::AlternativesFactory | |
| RMF::decorator::AtomFactory | |
| RMF::decorator::BackwardsCompatibilityFragmentFactory | |
| RMF::decorator::BallFactory | |
| RMF::decorator::BondFactory | |
| RMF::decorator::ChainFactory | |
| RMF::decorator::ClusterProvenanceFactory | |
| RMF::decorator::ColoredFactory | |
| RMF::decorator::CombineProvenanceFactory | |
| RMF::decorator::CopyFactory | |
| RMF::decorator::CylinderFactory | |
| RMF::decorator::DiffuserFactory | |
| RMF::decorator::DomainFactory | |
| RMF::decorator::EllipsoidFactory | |
| RMF::decorator::ExplicitResolutionFactory | |
| RMF::decorator::ExternalFactory | |
| RMF::decorator::FilterProvenanceFactory | |
| RMF::decorator::FragmentFactory | |
| RMF::decorator::GaussianParticleFactory | |
| RMF::decorator::IntermediateParticleFactory | |
| RMF::decorator::JournalArticleFactory | |
| RMF::decorator::ParticleFactory | |
| RMF::decorator::ReferenceFactory | |
| RMF::decorator::ReferenceFrameFactory | |
| RMF::decorator::RepresentationFactory | |
| RMF::decorator::ResidueFactory | |
| RMF::decorator::RigidParticleFactory | |
| RMF::decorator::SampleProvenanceFactory | |
| RMF::decorator::ScaleFactory | |
| RMF::decorator::ScoreFactory | |
| RMF::decorator::ScriptProvenanceFactory | |
| RMF::decorator::SegmentFactory | |
| RMF::decorator::SoftwareProvenanceFactory | |
| RMF::decorator::StateFactory | |
| RMF::decorator::StructureProvenanceFactory | |
| RMF::decorator::TypedFactory | |
| RMF::FileConstHandle | A handle for a read-only RMF file |
| RMF::FileHandle | A handle for an RMF file |
| RMF::HDF5::Handle | Make sure an HDF5 handle is released |
| RMF::HDF5::SharedHandle | Share an HDF5 handle |
| RMF::ID< TagT > | A general purpose ID in RMF used, with different tags, to identify things |
| RMF::ID< CategoryTag > | |
| RMF::ID< FloatTag > | |
| RMF::ID< FrameTag > | |
| RMF::ID< IntsTag > | |
| RMF::ID< IntTag > | |
| RMF::ID< NodeTag > | |
| RMF::ID< StringsTag > | |
| RMF::ID< StringTag > | |
| RMF::ID< Vector3sTag > | |
| RMF::ID< Vector3Tag > | |
| RMF::ID< Vector4Tag > | |
| RMF::Label | A decorator-like class to mark certain nodes (e.g. molecule boundaries) |
| RMF::decorator::Assembly | |
| RMF::decorator::Molecule | |
| RMF::HDF5::MutableAttributes< Base > | |
| RMF::NodeConstHandle | A handle for a particular node in a read-only hierarchy |
| RMF::NodeHandle | A handle for a particular node in the hierarchy |
| RMF::TraverseHelper | Track common data that one needs to keep as one traverses the hierarchy |
| RMF::Nullable< Tr > | Return a possibly null value |
| RMF::HDF5::Object | |
| RMF::HDF5::ConstAttributes< Object > | |
| RMF::HDF5::ConstDataSetD< TypeTraits, D > | |
| RMF::HDF5::MutableAttributes< ConstDataSetD< TypeTraits, D > > | |
| RMF::HDF5::DataSetD< TypeTraits, D > | |
| RMF::HDF5::ConstGroup | |
| RMF::HDF5::MutableAttributes< ConstGroup > | |
| RMF::HDF5::Group | |
| RMF::HDF5::File | |
| RMF::HDF5::ConstFile | |
| RMF::RestoreCurrentFrame | Restore the frame that was current on creation upon destruction |
| RMF::SetCurrentFrame | Set the current frame to a value and then return it to the old value when this goes out of scope |
| RMF::Traits< T > | Traits classes describing how RMF uses types for storing data |
