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IMP Reference Guide
2.20.2
The Integrative Modeling Platform
IMP Manual
Reference Guide
Tutorial Index
Modules
Classes
Examples
Class List
Class Index
Class Hierarchy
Class Members
All
Functions
Variables
Enumerations
Related Functions
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~
- _ -
__init__() :
IMP.CommandDispatcher
,
IMP.bayesianem.restraint.GaussianEMRestraintWrapper
,
IMP.EMageFit.buildxlinks.Xlink
,
IMP.isd.TALOSReader.TALOSReader
,
IMP.modeller.IMPRestraints
,
IMP.modeller.ModellerRestraints
,
IMP.modeller.ModelLoader
,
IMP.parallel.Context
,
IMP.parallel.Manager
,
IMP.parallel.SGEQsubWorkerArray
,
IMP.pmi.analysis.Alignment
,
IMP.pmi.analysis.Clustering
,
IMP.pmi.analysis.GetModelDensity
,
IMP.pmi.analysis.Precision
,
IMP.pmi.analysis.RMSD
,
IMP.pmi.io.crosslink.CrossLinkDataBase
,
IMP.pmi.io.crosslink.CrossLinkDataBaseKeywordsConverter
,
IMP.pmi.io.crosslink.FilterOperator
,
IMP.pmi.io.crosslink.JaccardDistanceMatrix
,
IMP.pmi.macros.AnalysisReplicaExchange
,
IMP.pmi.macros.AnalysisReplicaExchange0
,
IMP.pmi.macros.BuildSystem
,
IMP.pmi.macros.ReplicaExchange
,
IMP.pmi.output.RMFHierarchyHandler
,
IMP.pmi.output.StatHierarchyHandler
,
IMP.pmi.plotting.topology.TopologyPlot
,
IMP.pmi.restraints.basic.BiStableDistanceRestraint
,
IMP.pmi.restraints.basic.CylinderRestraint
,
IMP.pmi.restraints.basic.DistanceRestraint
,
IMP.pmi.restraints.basic.DistanceToPointRestraint
,
IMP.pmi.restraints.basic.ExternalBarrier
,
IMP.pmi.restraints.basic.MembraneRestraint
,
IMP.pmi.restraints.basic.ResidueProteinProximityRestraint
,
IMP.pmi.restraints.crosslinking.AtomicCrossLinkMSRestraint
,
IMP.pmi.restraints.crosslinking.CrossLinkingMassSpectrometryRestraint
,
IMP.pmi.restraints.em.GaussianEMRestraint
,
IMP.pmi.restraints.em2d.ElectronMicroscopy2D
,
IMP.pmi.restraints.em2d.ElectronMicroscopy2D_FFT
,
IMP.pmi.restraints.npc.MembraneExclusionRestraint
,
IMP.pmi.restraints.npc.MembraneSurfaceLocationConditionalRestraint
,
IMP.pmi.restraints.npc.MembraneSurfaceLocationRestraint
,
IMP.pmi.restraints.npc.XYRadialPositionLowerRestraint
,
IMP.pmi.restraints.npc.XYRadialPositionRestraint
,
IMP.pmi.restraints.npc.XYRadialPositionUpperRestraint
,
IMP.pmi.restraints.npc.YAxialPositionLowerRestraint
,
IMP.pmi.restraints.npc.YAxialPositionRestraint
,
IMP.pmi.restraints.npc.YAxialPositionUpperRestraint
,
IMP.pmi.restraints.npc.ZAxialPositionLowerRestraint
,
IMP.pmi.restraints.npc.ZAxialPositionRestraint
,
IMP.pmi.restraints.npc.ZAxialPositionUpperRestraint
,
IMP.pmi.restraints.parameters.JeffreysPrior
,
IMP.pmi.restraints.parameters.WeightRestraint
,
IMP.pmi.restraints.proteomics.ConnectivityNetworkRestraint
,
IMP.pmi.restraints.proteomics.FuzzyBoolean
,
IMP.pmi.restraints.proteomics.FuzzyRestraint
,
IMP.pmi.restraints.saxs.SAXSRestraint
,
IMP.pmi.restraints.stereochemistry.CharmmForceFieldRestraint
,
IMP.pmi.restraints.stereochemistry.ConnectivityRestraint
,
IMP.pmi.restraints.stereochemistry.ElasticNetworkRestraint
,
IMP.pmi.restraints.stereochemistry.ExcludedVolumeSphere
,
IMP.pmi.restraints.stereochemistry.FusionRestraint
,
IMP.pmi.restraints.stereochemistry.HelixRestraint
,
IMP.pmi.restraints.stereochemistry.PlaneDihedralRestraint
,
IMP.pmi.restraints.stereochemistry.PseudoAtomicRestraint
,
IMP.pmi.restraints.stereochemistry.ResidueBondRestraint
,
IMP.pmi.restraints.stereochemistry.SymmetryRestraint
,
IMP.pmi.samplers.MolecularDynamics
,
IMP.pmi.samplers.MonteCarlo
,
IMP.pmi.samplers.ReplicaExchange
,
IMP.pmi.tools.Segments
,
IMP.pmi.tools.Stopwatch
,
IMP.pmi.topology.Molecule
,
IMP.pmi.topology.PDBSequences
,
IMP.pmi.topology.Sequences
,
IMP.pmi.topology.State
,
IMP.pmi.topology.System
,
IMP.pmi.topology.TempResidue
,
IMP.pmi.topology.TopologyReader
,
IMP.pmi1.analysis.Alignment
,
IMP.pmi1.analysis.Clustering
,
IMP.pmi1.analysis.GetModelDensity
,
IMP.pmi1.analysis.Precision
,
IMP.pmi1.analysis.RMSD
,
IMP.pmi1.io.crosslink.CrossLinkDataBaseKeywordsConverter
,
IMP.pmi1.io.crosslink.FilterOperator
,
IMP.pmi1.io.crosslink.JaccardDistanceMatrix
,
IMP.pmi1.macros.AnalysisReplicaExchange
,
IMP.pmi1.macros.AnalysisReplicaExchange0
,
IMP.pmi1.macros.BuildModel
,
IMP.pmi1.macros.BuildModel1
,
IMP.pmi1.macros.ReplicaExchange0
,
IMP.pmi1.output.RMFHierarchyHandler
,
IMP.pmi1.output.StatHierarchyHandler
,
IMP.pmi1.plotting.topology.TopologyPlot
,
IMP.pmi1.representation.Representation
,
IMP.pmi1.restraints.basic.BiStableDistanceRestraint
,
IMP.pmi1.restraints.basic.CylinderRestraint
,
IMP.pmi1.restraints.basic.DistanceRestraint
,
IMP.pmi1.restraints.basic.DistanceToPointRestraint
,
IMP.pmi1.restraints.basic.ExternalBarrier
,
IMP.pmi1.restraints.crosslinking.AtomicCrossLinkMSRestraint
,
IMP.pmi1.restraints.crosslinking.CrossLinkingMassSpectrometryRestraint
,
IMP.pmi1.restraints.em.CrossCorrelationRestraint
,
IMP.pmi1.restraints.em.GaussianEMRestraint
,
IMP.pmi1.restraints.em2d.ElectronMicroscopy2D
,
IMP.pmi1.restraints.em2d.ElectronMicroscopy2D_FFT
,
IMP.pmi1.restraints.npc.MembraneExclusionRestraint
,
IMP.pmi1.restraints.npc.MembraneSurfaceLocationConditionalRestraint
,
IMP.pmi1.restraints.npc.MembraneSurfaceLocationRestraint
,
IMP.pmi1.restraints.npc.XYRadialPositionLowerRestraint
,
IMP.pmi1.restraints.npc.XYRadialPositionRestraint
,
IMP.pmi1.restraints.npc.XYRadialPositionUpperRestraint
,
IMP.pmi1.restraints.npc.YAxialPositionLowerRestraint
,
IMP.pmi1.restraints.npc.YAxialPositionRestraint
,
IMP.pmi1.restraints.npc.YAxialPositionUpperRestraint
,
IMP.pmi1.restraints.npc.ZAxialPositionLowerRestraint
,
IMP.pmi1.restraints.npc.ZAxialPositionRestraint
,
IMP.pmi1.restraints.npc.ZAxialPositionUpperRestraint
,
IMP.pmi1.restraints.parameters.JeffreysPrior
,
IMP.pmi1.restraints.parameters.WeightRestraint
,
IMP.pmi1.restraints.proteomics.ConnectivityNetworkRestraint
,
IMP.pmi1.restraints.proteomics.FuzzyBoolean
,
IMP.pmi1.restraints.proteomics.FuzzyRestraint
,
IMP.pmi1.restraints.RestraintBase
,
IMP.pmi1.restraints.saxs.SAXSRestraint
,
IMP.pmi1.restraints.stereochemistry.CharmmForceFieldRestraint
,
IMP.pmi1.restraints.stereochemistry.ConnectivityRestraint
,
IMP.pmi1.restraints.stereochemistry.ElasticNetworkRestraint
,
IMP.pmi1.restraints.stereochemistry.ExcludedVolumeSphere
,
IMP.pmi1.restraints.stereochemistry.FusionRestraint
,
IMP.pmi1.restraints.stereochemistry.HelixRestraint
,
IMP.pmi1.restraints.stereochemistry.PlaneDihedralRestraint
,
IMP.pmi1.restraints.stereochemistry.PseudoAtomicRestraint
,
IMP.pmi1.restraints.stereochemistry.ResidueBondRestraint
,
IMP.pmi1.restraints.stereochemistry.SymmetryRestraint
,
IMP.pmi1.samplers.MolecularDynamics
,
IMP.pmi1.samplers.MonteCarlo
,
IMP.pmi1.samplers.ReplicaExchange
,
IMP.pmi1.tools.Segments
,
IMP.pmi1.tools.Stopwatch
,
IMP.pmi1.topology.Sequences
,
IMP.pmi1.topology.TopologyReader
,
IMP.sampcon.good_scoring_model_selector.GoodScoringModelSelector
,
IMP.sampcon.precision_rmsd.GetModelDensity
,
write_a_metric.MyMetric
__lt__() :
IMP.EMageFit.solutions_io.HeapRecord
__new__() :
IMP.EMageFit.solutions_io.HeapRecord