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IMP Reference Guide
2.20.2
The Integrative Modeling Platform
IMP Manual
Reference Guide
Tutorial Index
Modules
Classes
Examples
Class List
Class Index
Class Hierarchy
Class Members
All
Functions
Variables
Enumerations
Related Functions
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- p -
pad() :
IMP::em::DensityMap
pad_margin() :
IMP::em::DensityMap
PairContainerAdaptor() :
IMP::PairContainerAdaptor
PairContainerSet() :
IMP::container::PairContainerSet
PairRestraint() :
IMP::core::PairRestraint
PairsConstraint() :
IMP::container::PairsConstraint
PairsOptimizerState() :
IMP::container::PairsOptimizerState
PairsRestraint() :
IMP::container::PairsRestraint
ParabolicFit2D() :
IMP::algebra::ParabolicFit2D
parse_args() :
IMP.ArgumentParser
parse_file() :
IMP.pmi.mmcif.GMMParser
Particle() :
IMP::Particle
particle_distance() :
IMP.test.TestCase
ParticleAdaptor() :
IMP::ParticleAdaptor
ParticleFactory() :
IMP::npctransport::ParticleFactory
ParticlesDummyRestraint() :
IMP::em2d::ParticlesDummyRestraint
ParticleTransportStatisticsOptimizerState() :
IMP::npctransport::ParticleTransportStatisticsOptimizerState
PathLocalPlanner() :
IMP::kinematics::PathLocalPlanner
PbcBoxedMover() :
IMP::spb::PbcBoxedMover
PbcBoxedRigidBodyMover() :
IMP::spb::PbcBoxedRigidBodyMover
PCAAligner() :
IMP::em::PCAAligner
PCAFitRestraint() :
IMP::em2d::PCAFitRestraint
,
IMP::em::PCAFitRestraint
PenalizedComplexityPrior() :
IMP::isd::PenalizedComplexityPrior
pick_max() :
IMP::em::DensityMap
plan() :
IMP::kinematics::PathLocalPlanner
plot() :
IMP.isd.Analysis.Analysis
plot_table() :
IMP.pmi1.io.xltable.XLTable
plot_violations() :
IMP.pmi.restraints.crosslinking.AtomicCrossLinkMSRestraint
,
IMP.pmi1.restraints.crosslinking.AtomicCrossLinkMSRestraint
pmi_range() :
IMP.pmi.mmcif.AsymUnit
,
IMP.pmi.mmcif.Entity
,
IMP.pmi1.mmcif.AsymUnit
,
IMP.pmi1.mmcif.Entity
pmi_residue() :
IMP.pmi.mmcif.AsymUnit
,
IMP.pmi.mmcif.Entity
,
IMP.pmi1.mmcif.AsymUnit
,
IMP.pmi1.mmcif.Entity
PolarResamplingParameters() :
IMP::em2d::PolarResamplingParameters
PoreRadiusSingletonScore() :
IMP::npctransport::PoreRadiusSingletonScore
precision() :
IMP.pmi.macros.AnalysisReplicaExchange
,
IMP.pmi1.macros.AnalysisReplicaExchange
print_centers() :
IMP::kmeans::KMeans
print_hard() :
IMP::em::ImageHeader
PrismaticJoint() :
IMP::kinematics::PrismaticJoint
probabilistic_check() :
IMP.test.TestCase
ProbabilisticSubsetFilterTable() :
IMP::domino::ProbabilisticSubsetFilterTable
Profile() :
IMP::saxs::Profile
profile_2_distribution() :
IMP::saxs::Profile
ProfileFitter() :
IMP::saxs::ProfileFitter< ScoringFunctionT >
Profiler() :
IMP::benchmark::Profiler
project() :
IMP::em::SampledDensityMap
ProjectingOptions() :
IMP::em2d::ProjectingOptions
ProjectingParameters() :
IMP::em2d::ProjectingParameters
ProjectionStates() :
IMP::em2d::ProjectionStates
propagate_coordinates() :
IMP::atom::MolecularDynamics
,
IMP::isd::MolecularDynamics
,
IMP::spb::MolecularDynamicsWithWte
propagate_velocities() :
IMP::atom::MolecularDynamics
,
IMP::isd::MolecularDynamics
,
IMP::spb::MolecularDynamicsWithWte
propose() :
IMP::core::MonteCarloMover
ProteinKinematics() :
IMP::kinematics::ProteinKinematics
prune_redundant_structures() :
IMP.pmi.macros.AnalysisReplicaExchange
,
IMP.pmi1.macros.AnalysisReplicaExchange
pull_back_body_member_adjoints() :
IMP::core::RigidBody
pull_back_member_adjoints() :
IMP::core::RigidBody
pull_back_members_adjoints() :
IMP::core::RigidBody
put() :
IMP.isd.utils.Pipe