Here is a list of all documented class members with links to the class documentation for each member:
- a -
- accept()
: IMP::core::MonteCarloMover
- acquire_service()
: IMP.isd.AbstractGrid.AbstractGrid
- add()
: IMP::saxs::RadialDistributionFunction
, IMP.em2d.buildxlinks.XlinksDict
, IMP::saxs::Profile
, IMP::em::DensityMap
, IMP::statistics::Histogram
, IMP::statistics::HistogramD< D, Grid >
- add_alias()
: IMP::kernel::Key< ID, LazyAdd >
- add_atom_type()
: IMP::atom::AtomType
- add_atom_types()
: IMP::atom::CHARMMTopology
- add_attribute()
: IMP::kernel::Model
- add_bonds()
: IMP::atom::CHARMMTopology
, IMP::atom::ForceFieldParameters
- add_branch_and_bound_assignments_table()
: IMP.em2d.DominoModel.DominoModel
- add_cache_attribute()
: IMP::kernel::Model
- add_category()
: IMP.isd.Statistics.Statistics
- add_ccc_table()
: IMP.em2d.solutions_io.ResultsDB
- add_charges()
: IMP::atom::CHARMMTopology
- add_child()
: IMP::atom::Hierarchy
- add_close_pair_score()
: IMP::core::IncrementalScoringFunction
- add_cluster_record()
: IMP.em2d.solutions_io.ResultsDB
- add_clusters_table()
: IMP.em2d.solutions_io.ResultsDB
- add_column()
: IMP.em2d.Database.Database2
- add_columns()
: IMP.em2d.Database.Database2
- add_coordinates()
: IMP::atom::CHARMMTopology
, IMP.isd.Statistics.Statistics
- add_data()
: IMP.isd.Analysis.Analysis
- add_data_pt()
: IMP::kmeans::KMeans
- add_dihedrals()
: IMP::atom::CHARMMTopology
- add_entry()
: IMP::saxs::Profile
, IMP.isd.Statistics.Statistics
- add_errors()
: IMP::saxs::Profile
- add_exclusion_filter_table()
: IMP.em2d.DominoModel.DominoModel
- add_full_datum()
: IMP.isd.TALOSReader.TALOSReader
- add_impropers()
: IMP::atom::CHARMMTopology
- add_in_plane_transformation()
: IMP::em2d::RegistrationResult
- add_mean_datum()
: IMP.isd.TALOSReader.TALOSReader
- add_member()
: IMP::core::RigidBody
- add_missing_atoms()
: IMP::atom::CHARMMTopology
- add_native_record()
: IMP.em2d.solutions_io.ResultsDB
- add_noise()
: IMP::saxs::Profile
- add_non_rigid_member()
: IMP::core::RigidBody
- add_partial_profiles()
: IMP::saxs::Profile
- add_particle()
: IMP::core::TableRefiner
, IMP::kernel::Model
- add_placement_scores_table()
: IMP.em2d.solutions_io.ResultsDB
- add_predicate()
: IMP::container::DistributePairsScoreState
, IMP::container::DistributeQuadsScoreState
, IMP::container::DistributeSingletonsScoreState
, IMP::container::DistributeTripletsScoreState
- add_python_code()
: IMP::display::ChimeraWriter
- add_radii()
: IMP::atom::ForceFieldParameters
- add_record()
: IMP.em2d.solutions_io.ResultsDB
- add_restraint()
: IMP.em2d.DominoModel.DominoModel
- add_restraint_score_filter_table()
: IMP.em2d.DominoModel.DominoModel
- add_restraints()
: IMP::domino::RestraintCache
- add_results_table()
: IMP.em2d.solutions_io.ResultsDB
- add_score()
: IMP::kernel::ScoreAccumulator
- add_score_and_derivatives()
: IMP::kernel::Restraint
- add_sequence()
: IMP::atom::CHARMMTopology
- add_server()
: IMP.isd.AbstractGrid.AbstractGrid
- add_slave()
: IMP.parallel.Manager
- add_solution()
: IMP::em::FittingSolutions
- add_task()
: IMP.parallel.Context
- add_term()
: IMP::modeller::MultipleBinormalRestraint
- add_to_derivative()
: IMP::core::XYZ
- add_to_derivatives()
: IMP::core::XYZ
, IMP::isd::BivariateFunction
, IMP::isd::Covariance1DFunction
, IMP::isd::UnivariateFunction
, IMP::isd::Linear1DFunction
, IMP::isd::GeneralizedGuinierPorodFunction
- add_to_particle_derivative()
: IMP::isd::Linear1DFunction
, IMP::isd::BivariateFunction
, IMP::isd::Covariance1DFunction
, IMP::isd::UnivariateFunction
, IMP::isd::GeneralizedGuinierPorodFunction
- add_to_representation()
: IMP.restrainer.Restraint
- add_undecorator()
: IMP::kernel::Model
- add_voxel()
: IMP::algebra::SparseGridStorageD< D, VT, Base, Map >
- add_well_depths()
: IMP::atom::ForceFieldParameters
- after_evaluate()
: IMP::kernel::ScoreState
- align()
: IMP::em::PCAAligner
- align_rigid_bodies_states()
: IMP.em2d.DominoModel.DominoModel
- AlignSymmetric()
: IMP::cnmultifit::AlignSymmetric
- AllBipartitePairContainersTemp
: IMP::container::AllBipartitePairContainer
- AllPairContainer()
: IMP::container::AllPairContainer
- AllPairContainersTemp
: IMP::container::AllPairContainer
- AmbiguousNOERestraint()
: IMP::isd::AmbiguousNOERestraint
- AmbiguousRestraint()
: IMP::isd::AmbiguousRestraint
- AngleRestraint()
: IMP::core::AngleRestraint
- AngleSingletonScore()
: IMP::atom::AngleSingletonScore
- AngleSingletonScoresTemp
: IMP::atom::AngleSingletonScore
- AngleTripletScore()
: IMP::core::AngleTripletScore
- append()
: IMP.isd.utils.Pipe
- apply()
: IMP::em2d::ProjectionMask
, IMP::kernel::QuadModifier
, IMP::kernel::QuadContainer
, IMP::kernel::PairContainer
, IMP::kernel::PairModifier
, IMP::atom::CHARMMPatch
, IMP::kernel::TripletContainer
, IMP::kernel::SingletonContainer
, IMP::kernel::SingletonModifier
, IMP::kernel::TripletModifier
- apply_default_patches()
: IMP::atom::CHARMMSegmentTopology
, IMP::atom::CHARMMTopology
- apply_generic()
: IMP::container::QuadContainerSet
, IMP::container::TripletContainerSet
, IMP::container::PairContainerSet
, IMP::container::ExclusiveConsecutivePairContainer
, IMP::kernel::TripletContainer
, IMP::kernel::PairContainer
, IMP::kernel::SingletonContainer
, IMP::container::ConsecutivePairContainer
, IMP::container::SingletonContainerSet
, IMP::kernel::QuadContainer
- apply_index()
: IMP::kernel::TripletModifier
, IMP::kernel::PairModifier
, IMP::kernel::SingletonModifier
, IMP::kernel::QuadModifier
- apply_indexes()
: IMP::kernel::PairModifier
, IMP::kernel::TripletModifier
, IMP::kernel::SingletonModifier
, IMP::kernel::QuadModifier
- apply_to_current_contents()
: IMP::base::SparseSymmetricPairMemoizer< Generator, Checker >
- assert_number()
: IMP.test.RefCountChecker
, IMP.test.DirectorObjectChecker
- assertApplicationExitedCleanly()
: IMP.test.ApplicationTestCase
- assertClassNames()
: IMP.test.TestCase
- assertFunctionNames()
: IMP.test.TestCase
- assertShow()
: IMP.test.TestCase
- assertValueObjects()
: IMP.test.TestCase
- assertXYZDerivativesInTolerance()
: IMP.test.TestCase
- assign_velocities()
: IMP::atom::MolecularDynamics
, IMP::isd::MolecularDynamics
- AssignmentContainersTemp
: IMP::domino::AssignmentContainer
- AssignmentsTablesTemp
: IMP::domino::AssignmentsTable
- Astart
: IMP::em::SpiderHeader
- AT_CA
: IMP::atom::AtomType
- AT_N
: IMP::atom::AtomType
- AT_UNKNOWN
: IMP::atom::AtomType