Here is a list of all documented class members with links to the class documentation for each member:
- c -
- calc_all_voxel2loc()
: IMP::em::DensityMap
- calc_score()
: IMP::em::CoarseCC
- calcRMS()
: IMP::em::DensityMap
- calculate_derivative_distribution()
: IMP::saxs::DeltaDistributionFunction
- calculate_I0()
: IMP::saxs::Profile
- calculate_particles_bounding_box()
: IMP::em::SampledDensityMap
- calculate_profile()
: IMP::saxs::Profile
- calculate_profile_constant_form_factor()
: IMP::saxs::Profile
- calculate_profile_partial()
: IMP::saxs::Profile
- calls_counter_
: IMP::em::CoarseCCatIntervals
- cap_velocity_component()
: IMP::atom::MolecularDynamics
- ccc_
: IMP::em2d::RegistrationResult
- CenteredMat()
: IMP::em2d::CenteredMat
- CentroidOfRefined()
: IMP::core::CentroidOfRefined
- ChainPDBSelector()
: IMP::atom::ChainPDBSelector
- CHARMMIdealResidueTopologiesTemp
: IMP::atom::CHARMMIdealResidueTopology
- CHARMMParameters()
: IMP::atom::CHARMMParameters
- CHARMMParametersListTemp
: IMP::atom::CHARMMParameters
- CHARMMPatch()
: IMP::atom::CHARMMPatch
- CHARMMPatchesTemp
: IMP::atom::CHARMMPatch
- CHARMMResidueTopologiesTemp
: IMP::atom::CHARMMResidueTopology
- CHARMMResidueTopology()
: IMP::atom::CHARMMResidueTopology
- CHARMMResidueTopologyBasesTemp
: IMP::atom::CHARMMResidueTopologyBase
- CHARMMSegmentTopologiesTemp
: IMP::atom::CHARMMSegmentTopology
- CHARMMTopologiesTemp
: IMP::atom::CHARMMTopology
- check_if_is_connected()
: IMP.em2d.Database.Database2
- check_runnable_python_module()
: IMP.test.TestCase
- check_unary_function_deriv()
: IMP.test.TestCase
- check_unary_function_min()
: IMP.test.TestCase
- ChildrenRefiner()
: IMP::core::ChildrenRefiner
- ChiSquaredScoresTemp
: IMP::em2d::ChiSquaredScore
- clean()
: IMP::multifit::RMSDClustering< TransT >
- clear()
: IMP::em::ImageHeader
, IMP::misc::LogPairScore
- clear_caches()
: IMP::base::Object
, IMP::core::ExcludedVolumeRestraint
, IMP::core::MinimumRestraint
, IMP::kernel::ScoringFunction
- clear_data()
: IMP::kmeans::KMeans
- clear_particle_caches()
: IMP::kernel::Model
- clear_range_cache()
: IMP::kernel::Optimizer
- close()
: IMP.em2d.Database.Database2
- CloseBipartitePairContainer()
: IMP::container::CloseBipartitePairContainer
- ClosedCubicSpline()
: IMP::core::ClosedCubicSpline
- ClosePairContainer()
: IMP::container::ClosePairContainer
- ClosePairContainersTemp
: IMP::container::ClosePairContainer
- ClosePairsPairScore()
: IMP::core::ClosePairsPairScore
- cluster()
: IMP::multifit::RMSDClustering< TransT >
- Color()
: IMP::display::Color
- comments
: IMP::em::DensityHeader
- compare()
: IMP::algebra::VectorD< D >
- ComponentHeadersTemp
: IMP::multifit::ComponentHeader
- compose()
: IMP::algebra::Transformation2D
, IMP::algebra::Transformation3D
- compute_xyz_top()
: IMP::em::DensityHeader
- Configuration()
: IMP::kernel::Configuration
- ConfigurationSetRMSDMetric()
: IMP::statistics::ConfigurationSetRMSDMetric
- ConfigurationSetsTemp
: IMP::kernel::ConfigurationSet
- ConfigurationSetXYZEmbedding()
: IMP::statistics::ConfigurationSetXYZEmbedding
- ConfigurationsTemp
: IMP::kernel::Configuration
- connect()
: IMP.em2d.Database.Database2
- ConnectingPairContainer()
: IMP::container::ConnectingPairContainer
- ConnectingPairContainersTemp
: IMP::container::ConnectingPairContainer
- ConnectivityRestraint()
: IMP::core::ConnectivityRestraint
- ConsecutivePairContainer()
: IMP::container::ConsecutivePairContainer
- ConsecutivePairContainersTemp
: IMP::container::ConsecutivePairContainer
- ConstantRestraint()
: IMP::core::ConstantRestraint
- ConstraintsTemp
: IMP::kernel::Constraint
- ContainersTemp
: IMP::kernel::Container
- convolution()
: IMP::em::CoarseConvolution
- copy_files()
: IMP.isd.AbstractGrid.AbstractGrid
- copy_map()
: IMP::em::DensityMap
- Cosine()
: IMP::core::Cosine
- CoulombPairScoresTemp
: IMP::atom::CoulombPairScore
- CoverBondsTemp
: IMP::atom::CoverBond
- CoverRefined()
: IMP::core::CoverRefined
- create()
: IMP::em2d::ProjectionMask
, IMP.em2d.Database.Database2
- create_angles()
: IMP::atom::CHARMMParameters
- create_bond()
: IMP::atom::Bonded
- create_clone()
: IMP::atom::Hierarchy
- create_clone_one()
: IMP::atom::Hierarchy
- create_coarse_assembly()
: IMP.em2d.DominoModel.DominoModel
- create_compatible_rigid_body()
: IMP::core::RigidBody
- create_connectivity_restraint()
: IMP::atom::Selection
- create_cover()
: IMP::atom::Selection
- create_current_decomposition()
: IMP::kernel::TripletScore
, IMP::kernel::Restraint
, IMP::kernel::PairScore
, IMP::kernel::QuadScore
, IMP::kernel::SingletonScore
- create_custom_bond()
: IMP::atom::Bonded
- create_decomposition()
: IMP::kernel::Restraint
- create_density_header()
: IMP::em::DensityHeader
- create_dihedrals()
: IMP::atom::CHARMMParameters
- create_distance_restraint()
: IMP::atom::Selection
- create_entry()
: IMP.isd.Analysis.Analysis
- create_excluded_volume_restraint()
: IMP::atom::Hierarchy
- create_fragment()
: IMP::atom::Hierarchy
- create_hierarchy()
: IMP::atom::CHARMMTopology
- create_internal_connectivity_restraint()
: IMP::atom::Selection
- create_log()
: IMP.restrainer.Display
- create_maps_for_resampling()
: IMP::em2d::PolarResamplingParameters
- create_mask()
: IMP::em2d::MasksManager
- create_masks()
: IMP::em2d::MasksManager
- create_merge_tree()
: IMP.em2d.DominoModel.DominoModel
- create_model_scoring_function()
: IMP::kernel::Model
- create_particles_in_box()
: IMP.test.TestCase
- create_point_particle()
: IMP.test.TestCase
- create_protein()
: IMP::atom::Hierarchy
- create_restraints()
: IMP::core::IncrementalScoringFunction
, IMP::kernel::ScoringFunction
- create_rigid_body()
: IMP::core::RigidBody
- create_scoring_function()
: IMP::kernel::Restraint
- create_simple_connectivity_on_molecules()
: IMP::restrainer::SimpleConnectivity
- create_simple_diameter()
: IMP::restrainer::SimpleDiameter
- create_simple_distance()
: IMP::restrainer::SimpleDistance
- create_simple_em_fit()
: IMP::restrainer::SimpleEMFit
- create_simple_excluded_volume_on_molecules()
: IMP::restrainer::SimpleExcludedVolume
- create_simple_excluded_volume_on_rigid_bodies()
: IMP::restrainer::SimpleExcludedVolume
- create_table()
: IMP.em2d.Database.Database2
- create_topology()
: IMP::atom::CHARMMParameters
- create_view()
: IMP.em2d.Database.Database2
- create_xyzr_particles()
: IMP::core::XYZR
- cross_correlation_coefficient()
: IMP::em::CoarseCC