Here is a list of all documented class members with links to the class documentation for each member:
- r -
- R_factor_score()
: IMP::saxs::RadialDistributionFunction
- RadialDistributionFunction()
: IMP::saxs::RadialDistributionFunction
- RadiusOfGyrationRestraint()
: IMP::multifit::RadiusOfGyrationRestraint
, IMP::saxs::RadiusOfGyrationRestraint
- randomize_particles()
: IMP.test.TestCase
- read()
: IMP::em::ImageHeader
, IMP::em::MRCReaderWriter
, IMP::em::SpiderMapReaderWriter
, IMP::em2d::Image
, IMP::em2d::RegistrationResult
, IMP.isd.TALOSReader.TALOSReader
, IMP::em::ImageHeader
- read_AMBER_stats()
: IMP.isd.Analysis.Analysis
- read_AMBER_variables()
: IMP.isd.Analysis.Analysis
- read_from_floats()
: IMP::em2d::SpiderImageReaderWriter
- read_from_image()
: IMP::em2d::RegistrationResult
- read_from_ints()
: IMP::em2d::JPGImageReaderWriter
- read_library_file()
: IMP::rotamer::RotamerLibrary
- read_map
: IMP::em::DensityMap
- read_merge_tree()
: IMP.em2d.DominoModel.DominoModel
- read_pts()
: IMP::algebra::VectorD< D >
- read_SAXS_file()
: IMP::saxs::Profile
- read_shell_commands()
: IMP.test.ApplicationTestCase
- read_spheres()
: IMP::algebra::SphereD< D >
- read_stats()
: IMP.isd.Analysis.Analysis
- read_variables()
: IMP.isd.Analysis.Analysis
- ReferenceFrame3D()
: IMP::algebra::ReferenceFrame3D
- RefinedPairsPairScore()
: IMP::core::RefinedPairsPairScore
- RefinersTemp
: IMP::kernel::Refiner
- reject()
: IMP::core::MonteCarloMover
- release_service()
: IMP.isd.AbstractGrid.AbstractGrid
- remove()
: IMP::base::SparseSymmetricPairMemoizer< Generator, Checker >
- remove_atom()
: IMP::atom::CHARMMIdealResidueTopology
- remove_attribute()
: IMP::kernel::Model
- remove_particle()
: IMP::core::TableRefiner
, IMP::kernel::Model
- remove_rigid_motion()
: IMP::atom::RemoveRigidMotionOptimizerState
- remove_translation()
: IMP::atom::RemoveTranslationOptimizerState
- RemoveRigidMotionOptimizerStatesTemp
: IMP::atom::RemoveRigidMotionOptimizerState
- RemoveTranslationOptimizerStatesTemp
: IMP::atom::RemoveTranslationOptimizerState
- RepulsiveDistancePairScoresTemp
: IMP::isd::RepulsiveDistancePairScore
- resample()
: IMP::em::SurfaceShellDensityMap
, IMP::em::SampledDensityMap
- rescale_velocities()
: IMP::atom::BerendsenThermostatOptimizerState
, IMP::atom::LangevinThermostatOptimizerState
, IMP::atom::VelocityScalingOptimizerState
, IMP.isd.shared_functions.sfo_common
- reset()
: IMP::core::PeriodicOptimizerState
- reset_data()
: IMP::em::DensityMap
- reset_move()
: IMP::core::MoverBase
, IMP::core::Mover
- reset_moved_particles()
: IMP::core::IncrementalScoringFunction
- Restraint()
: IMP::kernel::Restraint
, IMP::saxs::Restraint
- RestraintScoreSubsetFilterTable()
: IMP::domino::RestraintScoreSubsetFilterTable
- RestraintScoreSubsetFilterTablesTemp
: IMP::domino::RestraintScoreSubsetFilterTable
- RestraintSet()
: IMP::kernel::RestraintSet
- RestraintSetsTemp
: IMP::kernel::RestraintSet
- RestraintsTemp
: IMP::kernel::Restraint
- retrieve_data()
: IMP.em2d.Database.Database2
- RigidBodyDistancePairScore()
: IMP::core::RigidBodyDistancePairScore
- RMSDCalculator()
: IMP::atom::RMSDCalculator
- RMSDClustering()
: IMP::multifit::RMSDClustering< TransT >
- RotamerAngleTuple()
: IMP::rotamer::RotamerAngleTuple
- RotamerCalculator()
: IMP::rotamer::RotamerCalculator
- RotamerLibrary()
: IMP::rotamer::RotamerLibrary
- Rotation2D()
: IMP::algebra::Rotation2D
- Rotation3D()
: IMP::algebra::Rotation3D
- RTflag
: IMP::em::SpiderHeader
- run()
: IMP.restrainer.XMLRestraint
, IMP.restrainer.XMLDisplay
, IMP.restrainer.XMLRepresentation
- run_application()
: IMP.test.ApplicationTestCase
- run_example()
: IMP.test.TestCase
- run_monte_carlo()
: IMP.em2d.MonteCarloRelativeMoves.MonteCarloRelativeMoves
- run_monte_carlo_with_relative_movers()
: IMP.em2d.MonteCarloRelativeMoves.MonteCarloRelativeMoves
- run_python_application()
: IMP.test.ApplicationTestCase
- run_python_module()
: IMP.test.TestCase
- run_script()
: IMP.test.ApplicationTestCase
- run_shell_command()
: IMP.test.ApplicationTestCase