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IMP Reference Guide
develop.d97d4ead1f,2024/11/21
The Integrative Modeling Platform
IMP Manual
Reference Guide
Tutorial Index
Modules
Classes
Examples
include
IMP
core
version 20241121.develop.d97d4ead1f
Transform.h
Go to the documentation of this file.
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/**
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* \file IMP/core/Transform.h \brief Transform a particle
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*
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* Copyright 2007-2022 IMP Inventors. All rights reserved.
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*
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*/
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#ifndef IMPCORE_TRANSFORM_H
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#define IMPCORE_TRANSFORM_H
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#include <IMP/core/core_config.h>
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#include <
IMP/algebra/Transformation3D.h
>
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#include <
IMP/SingletonModifier.h
>
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#include <
IMP/singleton_macros.h
>
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#include <cereal/access.hpp>
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#include <cereal/types/base_class.hpp>
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IMPCORE_BEGIN_NAMESPACE
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//! Apply a transformation to a passed particle
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/**
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\see algebra::Transformation3D
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*/
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class
IMPCOREEXPORT
Transform
:
public
SingletonModifier
{
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public
:
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//! Initialize
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/**
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\param[in] t a 3d transformation to be applied on a particle
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\param[in] ignore_non_xyz if false then applying the transformation
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on a non XYZ particle will result in an exception.
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*/
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Transform
(
const
algebra::Transformation3D
&t,
bool
ignore_non_xyz =
false
);
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Transform
() {}
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virtual
void
apply_index
(
Model
*m,
ParticleIndex
p)
const
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override
;
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virtual
ModelObjectsTemp
do_get_inputs
(
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Model
*m,
const
ParticleIndexes
&pis)
const override
;
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virtual
ModelObjectsTemp
do_get_outputs
(
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Model
*m,
const
ParticleIndexes
&pis)
const override
;
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IMP_SINGLETON_MODIFIER_METHODS
(
Transform
);
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IMP_OBJECT_METHODS
(
Transform
);
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;
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private
:
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algebra::Transformation3D
t_;
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bool
ignore_non_xyz_;
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friend
class
cereal::access;
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template
<
class
Archive>
void
serialize(Archive &ar) {
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ar(cereal::base_class<SingletonModifier>(
this
), t_, ignore_non_xyz_);
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}
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IMP_OBJECT_SERIALIZE_DECL
(
Transform
);
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};
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IMPCORE_END_NAMESPACE
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#endif
/* IMPCORE_TRANSFORM_H */
IMP::SingletonModifier
A base class for modifiers of ParticlesTemp.
Definition:
SingletonModifier.h:32
SingletonModifier.h
A Modifier on ParticlesTemp.
IMP::algebra::Transformation3D
Simple 3D transformation class.
Definition:
Transformation3D.h:37
IMP_OBJECT_METHODS
#define IMP_OBJECT_METHODS(Name)
Define the basic things needed by any Object.
Definition:
object_macros.h:25
IMP::Index< ParticleIndexTag >
singleton_macros.h
Macros for various classes.
IMP::ParticleOutputs::do_get_outputs
virtual ModelObjectsTemp do_get_outputs(Model *m, const ParticleIndexes &pis) const =0
Overload this method to specify the outputs.
IMP::Vector
A more IMP-like version of the std::vector.
Definition:
Vector.h:50
IMP::Model
Class for storing model, its restraints, constraints, and particles.
Definition:
Model.h:86
IMP_SINGLETON_MODIFIER_METHODS
#define IMP_SINGLETON_MODIFIER_METHODS(Name)
Definition:
singleton_macros.h:124
IMP_OBJECT_SERIALIZE_DECL
#define IMP_OBJECT_SERIALIZE_DECL(Name)
Declare methods needed for serialization of Object pointers.
Definition:
object_macros.h:95
IMP::ParticleInputs::do_get_inputs
virtual ModelObjectsTemp do_get_inputs(Model *m, const ParticleIndexes &pis) const =0
Overload this method to specify the inputs.
IMP::core::Transform
Apply a transformation to a passed particle.
Definition:
Transform.h:23
Transformation3D.h
Simple 3D transformation class.
IMP::SingletonModifier::apply_index
virtual void apply_index(Model *m, ParticleIndex v) const =0