IMP::core::ClosePairsPairScore Class Reference
#include <IMP/core/ClosePairsPairScore.h>
Inheritance diagram for IMP::core::ClosePairsPairScore:Public Member Functions | |
| ClosePairsPairScore (PairScore *f, Refiner *r, Float max_distance) | |
| Restraints | create_current_decomposition (Model *m, const ParticleIndexPair &vt) const |
| virtual void | do_show (std::ostream &out) const |
| ParticlePairsTemp | get_close_pairs (const ParticlePair &pp) const |
| Public Member Functions inherited from IMP::kernel::PairScore | |
| PairScore (std::string name="PairScore %1%") | |
| Restraints | create_current_decomposition (Model *m, const ParticleIndexPair &vt) const |
| virtual double | evaluate (const ParticlePair &vt, DerivativeAccumulator *da) const |
| Compute the score and the derivative if needed. | |
| virtual double | evaluate_if_good_index (Model *m, const ParticleIndexPair &vt, DerivativeAccumulator *da, double max) const |
| Compute the score and the derivative if needed. | |
| virtual double | evaluate_if_good_indexes (Model *m, const ParticleIndexPairs &o, DerivativeAccumulator *da, double max, unsigned int lower_bound, unsigned int upper_bound) const |
| virtual double | evaluate_index (Model *m, const ParticleIndexPair &vt, DerivativeAccumulator *da) const |
| Compute the score and the derivative if needed. | |
| virtual double | evaluate_indexes (Model *m, const ParticleIndexPairs &o, DerivativeAccumulator *da, unsigned int lower_bound, unsigned int upper_bound) const |
| ContainersTemp | get_input_containers (Particle *p) const |
| ParticlesTemp | get_input_particles (Particle *p) const |
| ModelObjectsTemp | get_inputs (Model *m, const ParticleIndexes &pis) const |
| Public Member Functions inherited from IMP::base::Object | |
| virtual void | clear_caches () |
| virtual IMP::base::VersionInfo | get_version_info () const =0 |
| Get information about the module and version of the object. | |
| void | set_check_level (CheckLevel l) |
| void | set_log_level (LogLevel l) |
| Set the logging level used in this object. More... | |
| void | set_was_used (bool tf) const |
| void | show (std::ostream &out=std::cout) const |
| const std::string & | get_name () const |
| void | set_name (std::string name) |
Additional Inherited Members | |
| Public Types inherited from IMP::kernel::PairScore | |
| typedef ParticlePair | Argument |
| typedef ParticleIndexPair | IndexArgument |
| typedef PairModifier | Modifier |
| typedef const ParticlePair & | PassArgument |
| typedef const ParticleIndexPair & | PassIndexArgument |
| Protected Member Functions inherited from IMP::kernel::PairScore | |
| virtual Restraints | do_create_current_decomposition (Model *m, const ParticleIndexPair &vt) const |
| virtual ModelObjectsTemp | do_get_inputs (Model *m, const ParticleIndexes &pis) const =0 |
| Related Functions inherited from IMP::kernel::PairScore | |
| typedef IMP::base::Vector < IMP::base::WeakPointer < PairScore > > | PairScoresTemp |
Detailed Description
Apply the score to all pairs whose spheres are within a certain distance threshold.
- See Also
- ClosePairsScoreState
Definition at line 64 of file ClosePairsPairScore.h.
Constructor & Destructor Documentation
| IMP::core::ClosePairsPairScore::ClosePairsPairScore | ( | PairScore * | f, |
| Refiner * | r, | ||
| Float | max_distance | ||
| ) |
- Parameters
-
[in] r The Refiner to call on each particle [in] f The pair score to apply to the generated pairs [in] max_distance Only score pairs which are close than the max_distance
The documentation for this class was generated from the following file: