IMP Reference Guide  develop.cc86c9801d,2022/11/22 The Integrative Modeling Platform
IMP.pmi.restraints.stereochemistry.FusionRestraint Class Reference

Creates a restraint between the termini two polypeptides, to simulate the sequence connectivity. More...

Inherits object.

## Detailed Description

Creates a restraint between the termini two polypeptides, to simulate the sequence connectivity.

Note
This class is only available in Python.

Definition at line 827 of file restraints/stereochemistry.py.

def __init__

## Constructor & Destructor Documentation

 def IMP.pmi.restraints.stereochemistry.FusionRestraint.__init__ ( self, nterminal, cterminal, scale = 1.0, disorderedlength = False, upperharmonic = True, resolution = 1, label = 'None' )
Parameters
 nterminal - single PMI2 Hierarchy/molecule at the nterminal cterminal - single PMI2 Hierarchy/molecule at the cterminal scale Scale the maximal distance between the beads by this factor when disorderedlength is False. The maximal distance is calculated as ((float(residuegap) + 1.0) * 3.6) * scale. disorderedlength - This flag uses either disordered length calculated for random coil peptides (True) or zero surface-to-surface distance between beads (False) as optimal distance for the sequence connectivity restraint. upperharmonic - This flag uses either harmonic (False) or upperharmonic (True) in the intra-pair connectivity restraint. resolution - The resolution to connect things at - only used if you pass PMI objects label - A string to identify this restraint in the output/stat file

Definition at line 846 of file restraints/stereochemistry.py.

The documentation for this class was generated from the following file: