IMP Reference Guide
develop.374319d7bb,2024/06/17
The Integrative Modeling Platform

Basic SAXS restraint using ISD. More...
Inherits RestraintBase.
Basic SAXS restraint using ISD.
Definition at line 110 of file restraints/saxs.py.
Public Member Functions  
def  draw_gamma 
Draw gamma from lognormal distribution. More...  
def  draw_sigma 
Draw 1/sigma2 from gamma distribution. More...  
def  get_gamma_value 
Get value of gamma. More...  
def  optimize_gamma 
Set gamma to the value that maximizes its conditional likelihood. More...  
def  optimize_sigma 
Set sigma to the value that maximizes its conditional likelihood. More...  
def IMP.pmi.restraints.saxs.SAXSISDRestraint.draw_gamma  (  self  ) 
Draw gamma from lognormal distribution.
Definition at line 232 of file restraints/saxs.py.
def IMP.pmi.restraints.saxs.SAXSISDRestraint.draw_sigma  (  self  ) 
Draw 1/sigma2 from gamma distribution.
Definition at line 227 of file restraints/saxs.py.
def IMP.pmi.restraints.saxs.SAXSISDRestraint.get_gamma_value  (  self  ) 
Get value of gamma.
Definition at line 220 of file restraints/saxs.py.
def IMP.pmi.restraints.saxs.SAXSISDRestraint.optimize_gamma  (  self  ) 
Set gamma to the value that maximizes its conditional likelihood.
Definition at line 188 of file restraints/saxs.py.
def IMP.pmi.restraints.saxs.SAXSISDRestraint.optimize_sigma  (  self  ) 
Set sigma to the value that maximizes its conditional likelihood.
Definition at line 181 of file restraints/saxs.py.