IMP logo
IMP Reference Guide  develop.e1fe35f,2019/09/16
The Integrative Modeling Platform
IMP::pmi::TransformMover Class Reference

Modify the transformation of a rigid body. More...

#include <IMP/pmi/TransformMover.h>

+ Inheritance diagram for IMP::pmi::TransformMover:

Detailed Description

Modify the transformation of a rigid body.

The transformation of a rigid body is moved in a ball of given size. The probability distribution is uniform over the ball.

See Also
MonteCarlo

Definition at line 27 of file TransformMover.h.

Public Member Functions

 TransformMover (Model *m, Float max_translation, Float max_rotation)
 
 TransformMover (Model *m, algebra::Vector3D axis, Float max_translation, Float max_rotation)
 
 TransformMover (Model *m, IMP::ParticleIndexAdaptor p1i, IMP::ParticleIndexAdaptor p2i, Float max_translation, Float max_rotation)
 
void add_rigid_body_particle (IMP::ParticleIndexAdaptor pi)
 
void add_xyz_particle (IMP::ParticleIndexAdaptor pi)
 
IMP::algebra::Transformation3D get_last_transformation () const
 
Float get_maximum_rotation () const
 
Float get_maximum_translation () const
 
virtual std::string get_type_name () const
 
virtual ::IMP::VersionInfo get_version_info () const
 Get information about the module and version of the object. More...
 
void set_maximum_rotation (Float mr)
 
void set_maximum_translation (Float mt)
 
- Public Member Functions inherited from IMP::core::MonteCarloMover
 MonteCarloMover (Model *m, std::string name)
 
void accept ()
 Accept/commit any changes made to the Particles. More...
 
MonteCarloMoverResult propose ()
 Propose a modification. More...
 
void reject ()
 Roll back any changes made to the Particles. More...
 
unsigned int get_number_of_proposed () const
 
unsigned int get_number_of_accepted () const
 
void reset_statistics ()
 
- Public Member Functions inherited from IMP::ModelObject
 ModelObject (Model *m, std::string name)
 
bool get_has_dependencies () const
 Return whether this object has dependencies computed. More...
 
bool get_has_required_score_states () const
 Return whether score states are computed. More...
 
ModelObjectsTemp get_inputs () const
 
ModelObjectsTemps get_interactions () const
 Get the interacting sets induced by this ModelObject. More...
 
Modelget_model () const
 
ModelObjectsTemp get_outputs () const
 
const ScoreStatesTempget_required_score_states () const
 Get the score states that are ancestors of this in the dependency graph. More...
 
void set_has_dependencies (bool tf)
 Either invalidate the dependencies or ensure they are correct. More...
 
void set_has_required_score_states (bool tf)
 Compute the required score states. More...
 
- Public Member Functions inherited from IMP::Object
virtual void clear_caches ()
 
CheckLevel get_check_level () const
 
LogLevel get_log_level () const
 
void set_check_level (CheckLevel l)
 
void set_log_level (LogLevel l)
 Set the logging level used in this object. More...
 
void set_was_used (bool tf) const
 
void show (std::ostream &out=std::cout) const
 
const std::string & get_name () const
 
void set_name (std::string name)
 

Protected Member Functions

virtual ModelObjectsTemp do_get_inputs () const
 
virtual core::MonteCarloMoverResult do_propose ()
 Implement propose_move() More...
 
virtual void do_reject ()
 Implement reset_proposed_move() More...
 
- Protected Member Functions inherited from IMP::core::MonteCarloMover
virtual void do_accept ()
 Implement accept_proposed_move(); default implementation is empty. More...
 
virtual ModelObjectsTemp do_get_outputs () const
 
- Protected Member Functions inherited from IMP::ModelObject
virtual ModelObjectsTemps do_get_interactions () const
 
virtual void handle_set_has_required_score_states (bool)
 
- Protected Member Functions inherited from IMP::Object
 Object (std::string name)
 Construct an object with the given name. More...
 
virtual void do_destroy ()
 

Member Function Documentation

virtual ModelObjectsTemp IMP::pmi::TransformMover::do_get_inputs ( ) const
protectedvirtual

Get any Particle, Container or other ModelObjects read by this during evaluation. If you read everything in a container, you can just return that container.

Implements IMP::ModelObject.

virtual core::MonteCarloMoverResult IMP::pmi::TransformMover::do_propose ( )
protectedvirtual

Implement propose_move()

Implements IMP::core::MonteCarloMover.

virtual void IMP::pmi::TransformMover::do_reject ( )
protectedvirtual

Implement reset_proposed_move()

Implements IMP::core::MonteCarloMover.

virtual ::IMP::VersionInfo IMP::pmi::TransformMover::get_version_info ( ) const
virtual

Get information about the module and version of the object.

Reimplemented from IMP::Object.

Definition at line 125 of file TransformMover.h.


The documentation for this class was generated from the following file: