IMP Reference Guide  develop.cc86c9801d,2022/11/22 The Integrative Modeling Platform
IMP.pmi1.restraints.stereochemistry.ExcludedVolumeSphere Class Reference

A class to create an excluded volume restraint for a set of particles at a given resolution. More...

Inherits object.

## Detailed Description

A class to create an excluded volume restraint for a set of particles at a given resolution.

Can be initialized as a bipartite restraint between two sets of particles.

# Potential additional function: Variable resolution for each PMI object. Perhaps passing selection_tuples

with (PMI_object, resolution)

Note
This class is only available in Python.

Definition at line 168 of file /restraints/stereochemistry.py.

## Public Member Functions

def __init__
Constructor. More...

## Constructor & Destructor Documentation

 def IMP.pmi1.restraints.stereochemistry.ExcludedVolumeSphere.__init__ ( self, representation = None, included_objects = None, other_objects = None, resolution = 1000, kappa = 1.0 )

Constructor.

Parameters
 representation DEPRECATED - just pass objects included_objects Can be one of the following inputs: IMP Hierarchy, PMI System/State/Molecule/TempResidue, or a list/set of them other_objects Initializes a bipartite restraint between included_objects and other_objects Same format as included_objects resolution The resolution particles at which to impose the restraint. By default, the coarsest particles will be chosen. If a number is chosen, for each particle, the closest resolution will be used (see IMP.atom.Selection). kappa Restraint strength

Definition at line 180 of file /restraints/stereochemistry.py.

The documentation for this class was generated from the following file: