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IMP Reference Guide  develop.0ea7f7a4db,2020/10/23
The Integrative Modeling Platform
IMP::isd::Scale Class Reference

Add scale parameter to particle. More...

#include <IMP/isd/Scale.h>

+ Inheritance diagram for IMP::isd::Scale:

Detailed Description

Add scale parameter to particle.

This is just syntactic sugar for a Nuisance bounded to be positive.

Definition at line 24 of file Scale.h.

Public Member Functions

 Scale (::IMP::Model *m,::IMP::ParticleIndex id)
 
 Scale (const IMP::ParticleAdaptor &d)
 
void add_to_scale_derivative (Float d, DerivativeAccumulator &accum)
 
Float get_scale () const
 
Float get_scale_derivative () const
 
bool get_scale_is_optimized () const
 
void set_scale (Float d)
 
void set_scale_is_optimized (bool val)
 
void show (std::ostream &out=std::cout) const
 
- Public Member Functions inherited from IMP::isd::Nuisance
 Nuisance (::IMP::Model *m,::IMP::ParticleIndex id)
 
 Nuisance (const IMP::ParticleAdaptor &d)
 
void add_to_nuisance_derivative (Float d, DerivativeAccumulator &accum)
 
bool get_has_lower () const
 
bool get_has_upper () const
 
Float get_lower () const
 
Float get_nuisance () const
 
Float get_nuisance_derivative () const
 
bool get_nuisance_is_optimized () const
 
Float get_upper () const
 
void remove_lower ()
 
void remove_upper ()
 
void set_lower (Float d)
 
void set_lower (Particle *d)
 
void set_nuisance (Float d)
 
void set_nuisance_is_optimized (bool val)
 
void set_upper (Float d)
 
void set_upper (Particle *d)
 
void show (std::ostream &out=std::cout) const
 
- Public Member Functions inherited from IMP::Decorator
bool get_is_valid () const
 Returns true if constructed with a non-default constructor. More...
 
Modelget_model () const
 Returns the Model containing the particle. More...
 
Particleget_particle () const
 Returns the particle decorated by this decorator. More...
 
ParticleIndex get_particle_index () const
 Returns the particle index decorated by this decorator. More...
 
 operator Particle * () const
 
 operator ParticleIndex () const
 
Particleoperator-> () const
 

Static Public Member Functions

static bool get_is_setup (const IMP::ParticleAdaptor &p)
 
static bool get_is_setup (Model *m, ParticleIndex pi)
 
static FloatKey get_scale_key ()
 
static Scale setup_particle (Model *m, ParticleIndex pi)
 
static Scale setup_particle (IMP::ParticleAdaptor decorator)
 
static Scale setup_particle (Model *m, ParticleIndex pi, double scale)
 
static Scale setup_particle (IMP::ParticleAdaptor decorator, double scale)
 
- Static Public Member Functions inherited from IMP::isd::Nuisance
static bool get_is_setup (const IMP::ParticleAdaptor &p)
 
static bool get_is_setup (Model *m, ParticleIndex pi)
 
static FloatKey get_lower_key ()
 
static ParticleIndexKey get_lower_particle_key ()
 
static FloatKey get_nuisance_key ()
 
static FloatKey get_upper_key ()
 
static ParticleIndexKey get_upper_particle_key ()
 
static Nuisance setup_particle (Model *m, ParticleIndex pi)
 
static Nuisance setup_particle (IMP::ParticleAdaptor decorator)
 
static Nuisance setup_particle (Model *m, ParticleIndex pi, double nuisance)
 
static Nuisance setup_particle (IMP::ParticleAdaptor decorator, double nuisance)
 

Additional Inherited Members

- Protected Member Functions inherited from IMP::Decorator
 Decorator (Model *m, ParticleIndex pi)
 
 Decorator (ParticleAdaptor p)
 

Member Function Documentation

static Scale IMP::isd::Scale::setup_particle ( Model m,
ParticleIndex  pi 
)
static

Setup the particle so it can be used with this decorator.

Definition at line 30 of file Scale.h.

static Scale IMP::isd::Scale::setup_particle ( Model m,
ParticleIndex  pi,
double  scale 
)
static

Setup the particle so that it can be used with this decorator

Definition at line 31 of file Scale.h.

static Scale IMP::isd::Scale::setup_particle ( IMP::ParticleAdaptor  decorator,
double  scale 
)
static
See Also
setup_particle(m, pi, scale )

Definition at line 31 of file Scale.h.


The documentation for this class was generated from the following file: