Detailed Description

States that a set of Particles can have according to their positions and orientations in a grid. The orientations also determine the orientation of the projections of the particles.

Definition at line 73 of file domino_particle_states.h.

Public Member Functions
	ProjectionStates (const algebra::Vector3Ds &positions, const algebra::Rotation3Ds &orientations, const Images &projections, const String &name="ProjectionStates")

virtual unsigned int	get_number_of_particle_states () const override

Image *	get_projection (unsigned int i) const
	Returns the projection corresponding to the state i;. More...

virtual std::string	get_type_name () const override

virtual ::IMP::VersionInfo	get_version_info () const override
	Get information about the module and version of the object. More...

virtual void	load_particle_state (unsigned int, Particle *) const override

Public Member Functions inherited from IMP::em2d::GridStates
	GridStates (const algebra::Vector3Ds &positions, const algebra::Rotation3Ds &orientations, const String &name="GridStates")

algebra::Rotation3D	get_orientation (unsigned int i) const
	Returns the orientation corresponding to the state i. More...

algebra::Vector3D	get_position (unsigned int i) const
	Returns the position corresponding to the state i. More...

Public Member Functions inherited from IMP::domino::ParticleStates
	ParticleStates (std::string name="ParticleStates %1%")

virtual algebra::VectorKD	get_embedding (unsigned int i) const
	Return an embedding of the state. More...

virtual unsigned int	get_nearest_state (const algebra::VectorKD &v) const
	Return the state closest to a given embedding. More...

Public Member Functions inherited from IMP::Object
virtual void	clear_caches ()

CheckLevel	get_check_level () const

LogLevel	get_log_level () const

void	set_check_level (CheckLevel l)

void	set_log_level (LogLevel l)
	Set the logging level used in this object. More...

void	set_was_used (bool tf) const

void	show (std::ostream &out=std::cout) const

const std::string &	get_name () const

void	set_name (std::string name)

Protected Attributes
Images	projections_

Protected Attributes inherited from IMP::em2d::GridStates
unsigned int	number_of_states_

algebra::Rotation3Ds	orientations_

algebra::Vector3Ds	positions_

Additional Inherited Members
Protected Member Functions inherited from IMP::Object
	Object (std::string name)
	Construct an object with the given name. More...

virtual void	do_destroy ()

Constructor & Destructor Documentation

IMP::em2d::ProjectionStates::ProjectionStates	(	const algebra::Vector3Ds &	positions,
		const algebra::Rotation3Ds &	orientations,
		const Images &	projections,
		const String &	name = `"ProjectionStates"`
	)

Parameters

[in]	positions	Set of positions that the set of particles can have in the grid (points of the grid).
[in]	orientations	Orientations of the particles in in the grid
[in]	projections	of the particles in the given orientations. There must be correspondence between the orientations and the projections.
[in]	name

Note: The number of states considered is positions * orientations, as each position can have all orientations. \

Definition at line 91 of file domino_particle_states.h.

Member Function Documentation

Image* IMP::em2d::ProjectionStates::get_projection ( unsigned int i ) const

Returns the projection corresponding to the state i;.

virtual ::IMP::VersionInfo IMP::em2d::ProjectionStates::get_version_info ( ) const

overridevirtual

Get information about the module and version of the object.

Reimplemented from IMP::em2d::GridStates.

Definition at line 106 of file domino_particle_states.h.

The documentation for this class was generated from the following file:

domino_particle_states.h

Detailed Description

Public Member Functions

Protected Attributes

Additional Inherited Members

Constructor & Destructor Documentation

Member Function Documentation