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IMP Reference Guide  develop.cb6747d2d1,2024/03/28
The Integrative Modeling Platform
IMP::core::SurfaceMover Class Reference

Modify a surface orientation. More...

#include <IMP/core/SurfaceMover.h>

+ Inheritance diagram for IMP::core::SurfaceMover:

Detailed Description

Modify a surface orientation.

The Surface is transformed via translation, rotation, and/or reflection.

If combined with a LateralSurfaceConstraint, then only the normal component of the translation is kept.

See Also
Surface
LateralSurfaceConstraint
MonteCarlo

Definition at line 37 of file SurfaceMover.h.

Public Member Functions

 SurfaceMover (Model *m, ParticleIndex pi, Float max_translation, Float max_rotation, Float reflect_probability)
 
 SurfaceMover (Surface s, Float max_translation, Float max_rotation, Float reflect_probability)
 
Float get_maximum_rotation () const
 Get the maximum rotation. More...
 
Float get_maximum_translation () const
 Get the maximum translation. More...
 
Float get_reflect_probability () const
 Get the frequency of reflection moves. More...
 
Surface get_surface () const
 Get the surface being moved. More...
 
virtual std::string get_type_name () const override
 
virtual ::IMP::VersionInfo get_version_info () const override
 Get information about the module and version of the object. More...
 
void set_maximum_rotation (Float mr)
 Set the maximum rotation in radians. More...
 
void set_maximum_translation (Float mt)
 Set the maximum translation in angstroms. More...
 
void set_reflect_probability (Float rp)
 Set the frequency of reflection moves. More...
 
- Public Member Functions inherited from IMP::core::MonteCarloMover
 MonteCarloMover (Model *m, std::string name)
 
void accept ()
 Accept/commit any changes made to the Particles. More...
 
MonteCarloMoverResult propose ()
 Propose a modification. More...
 
void reject ()
 Roll back any changes made to the Particles. More...
 
unsigned int get_number_of_proposed () const
 
unsigned int get_number_of_accepted () const
 
void reset_statistics ()
 
- Public Member Functions inherited from IMP::ModelObject
 ModelObject (Model *m, std::string name)
 
bool get_has_dependencies () const
 Return whether this object has dependencies computed. More...
 
bool get_has_required_score_states () const
 Return whether score states are computed. More...
 
ModelObjectsTemp get_inputs () const
 
ModelObjectsTemps get_interactions () const
 Get the interacting sets induced by this ModelObject. More...
 
Modelget_model () const
 
ModelObjectsTemp get_outputs () const
 
const ScoreStatesTempget_required_score_states () const
 Get the score states that are ancestors of this in the dependency graph. More...
 
void set_has_dependencies (bool tf)
 Either invalidate the dependencies or ensure they are correct. More...
 
void set_has_required_score_states (bool tf)
 Compute the required score states. More...
 
- Public Member Functions inherited from IMP::Object
virtual void clear_caches ()
 
CheckLevel get_check_level () const
 
LogLevel get_log_level () const
 
void set_check_level (CheckLevel l)
 
void set_log_level (LogLevel l)
 Set the logging level used in this object. More...
 
void set_was_used (bool tf) const
 
void show (std::ostream &out=std::cout) const
 
const std::string & get_name () const
 
void set_name (std::string name)
 

Protected Member Functions

virtual ModelObjectsTemp do_get_inputs () const override
 
virtual MonteCarloMoverResult do_propose () override
 Implement propose_move() More...
 
virtual void do_reject () override
 Implement reset_proposed_move() More...
 
- Protected Member Functions inherited from IMP::core::MonteCarloMover
virtual void do_accept ()
 Implement accept_proposed_move(); default implementation is empty. More...
 
virtual ModelObjectsTemp do_get_outputs () const override
 
- Protected Member Functions inherited from IMP::ModelObject
virtual ModelObjectsTemps do_get_interactions () const
 
virtual void handle_set_has_required_score_states (bool)
 
- Protected Member Functions inherited from IMP::Object
 Object (std::string name)
 Construct an object with the given name. More...
 
virtual void do_destroy ()
 

Member Function Documentation

virtual ModelObjectsTemp IMP::core::SurfaceMover::do_get_inputs ( ) const
overrideprotectedvirtual

Get any Particle, Container or other ModelObjects read by this during evaluation. If you read everything in a container, you can just return that container.

Implements IMP::ModelObject.

virtual MonteCarloMoverResult IMP::core::SurfaceMover::do_propose ( )
overrideprotectedvirtual

Implement propose_move()

Implements IMP::core::MonteCarloMover.

virtual void IMP::core::SurfaceMover::do_reject ( )
overrideprotectedvirtual

Implement reset_proposed_move()

Implements IMP::core::MonteCarloMover.

Float IMP::core::SurfaceMover::get_maximum_rotation ( ) const

Get the maximum rotation.

Definition at line 77 of file SurfaceMover.h.

Float IMP::core::SurfaceMover::get_maximum_translation ( ) const

Get the maximum translation.

Definition at line 74 of file SurfaceMover.h.

Float IMP::core::SurfaceMover::get_reflect_probability ( ) const

Get the frequency of reflection moves.

Definition at line 80 of file SurfaceMover.h.

Surface IMP::core::SurfaceMover::get_surface ( ) const

Get the surface being moved.

Definition at line 83 of file SurfaceMover.h.

virtual ::IMP::VersionInfo IMP::core::SurfaceMover::get_version_info ( ) const
overridevirtual

Get information about the module and version of the object.

Reimplemented from IMP::Object.

Definition at line 89 of file SurfaceMover.h.

void IMP::core::SurfaceMover::set_maximum_rotation ( Float  mr)

Set the maximum rotation in radians.

void IMP::core::SurfaceMover::set_maximum_translation ( Float  mt)

Set the maximum translation in angstroms.

void IMP::core::SurfaceMover::set_reflect_probability ( Float  rp)

Set the frequency of reflection moves.


The documentation for this class was generated from the following file: