IMP Reference Guide
develop.1b08965de4,2025/02/17
The Integrative Modeling Platform
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Track creation of a system fragment by filtering. More...
#include <IMP/core/provenance.h>
Track creation of a system fragment by filtering.
Part of the system (usually the top of a Hierarchy) tagged with this decorator is understood to be a single frame within an ensemble that resulted from filtering a larger ensemble (the 'previous' provenance) in some fashion, such as
UsageException | if method not in get_allowed_methods() |
Definition at line 340 of file provenance.h.
Public Member Functions | |
FilterProvenance (::IMP::Model *m,::IMP::ParticleIndex id) | |
FilterProvenance (const IMP::ParticleAdaptor &d) | |
std::string | get_method () const |
int | get_number_of_frames () const |
double | get_threshold () const |
void | set_method (std::string method) const |
void | set_number_of_frames (int frames) const |
Set the number of frames. More... | |
void | set_threshold (double threshold) const |
Set the score threshold. More... | |
void | show (std::ostream &out=std::cout) const |
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Provenance (::IMP::Model *m,::IMP::ParticleIndex id) | |
Provenance (const IMP::ParticleAdaptor &d) | |
Provenance | get_previous () const |
void | set_previous (Provenance p) |
Set the previous provenance. More... | |
void | show (std::ostream &out=std::cout) const |
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bool | get_is_valid () const |
Returns true if constructed with a non-default constructor. More... | |
Model * | get_model () const |
Returns the Model containing the particle. More... | |
Particle * | get_particle () const |
Returns the particle decorated by this decorator. More... | |
ParticleIndex | get_particle_index () const |
Returns the particle index decorated by this decorator. More... | |
operator Particle * () const | |
operator ParticleIndex () const | |
Particle * | operator-> () const |
Static Public Member Functions | |
static bool | get_is_setup (Model *m, ParticleIndex pi) |
static bool | get_is_setup (const IMP::ParticleAdaptor &p) |
static FilterProvenance | setup_particle (IMP::ParticleAdaptor pa, std::string method, double threshold, int frames) |
static FilterProvenance | setup_particle (Model *m, ParticleIndex pi, std::string method, double threshold, int frames) |
static FilterProvenance | setup_particle (IMP::ParticleAdaptor pa, FilterProvenance o) |
static FilterProvenance | setup_particle (Model *m, ParticleIndex pi, FilterProvenance o) |
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static bool | get_is_setup (Model *m, ParticleIndex pi) |
static bool | get_is_setup (const IMP::ParticleAdaptor &p) |
static Provenance | setup_particle (Model *m, ParticleIndex pi) |
static Provenance | setup_particle (IMP::ParticleAdaptor pa) |
Additional Inherited Members | |
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Decorator (Model *m, ParticleIndex pi) | |
Decorator (ParticleAdaptor p) | |
std::string IMP::core::FilterProvenance::get_method | ( | ) | const |
Definition at line 387 of file provenance.h.
int IMP::core::FilterProvenance::get_number_of_frames | ( | ) | const |
Definition at line 398 of file provenance.h.
double IMP::core::FilterProvenance::get_threshold | ( | ) | const |
Definition at line 409 of file provenance.h.
void IMP::core::FilterProvenance::set_method | ( | std::string | method | ) | const |
Set the filtering method
IMP::UsageException | if not a valid method for filtering |
Definition at line 380 of file provenance.h.
void IMP::core::FilterProvenance::set_number_of_frames | ( | int | frames | ) | const |
Set the number of frames.
Definition at line 392 of file provenance.h.
void IMP::core::FilterProvenance::set_threshold | ( | double | threshold | ) | const |
Set the score threshold.
Definition at line 403 of file provenance.h.
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Definition at line 416 of file provenance.h.
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Definition at line 416 of file provenance.h.
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Definition at line 417 of file provenance.h.
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Definition at line 417 of file provenance.h.