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IMP Reference Guide
develop.d97d4ead1f,2024/11/21
The Integrative Modeling Platform
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Apply a PairFunction to a PairContainer to maintain an invariant. More...
#include <IMP/container/PairsConstraint.h>
Inheritance diagram for IMP::container::PairsConstraint:Apply a PairFunction to a PairContainer to maintain an invariant.
The score state is passed up to two PairModifiers, one to apply before evaluation and the other after. The one after should take a DerivativeAccumulator as its last argument for PairModifier::apply() and will only be called if the score was computed with derivatives.
Definition at line 41 of file PairsConstraint.h.
Public Member Functions | |
| PairsConstraint (PairModifier *before, PairModifier *after, PairContainerAdaptor c, std::string name="PairsConstraint %1%") | |
| virtual std::string | get_type_name () const override |
| virtual ::IMP::VersionInfo | get_version_info () const override |
| Get information about the module and version of the object. More... | |
| Public Member Functions inherited from IMP::Constraint | |
| Constraint (Model *m, std::string name="Constraint %1%") | |
| virtual void | do_after_evaluate (DerivativeAccumulator *da) override |
| Do any necessary updates after the model score is calculated. More... | |
| virtual void | do_before_evaluate () override |
| Update the state given the current state of the model. More... | |
| Public Member Functions inherited from IMP::ScoreState | |
| ScoreState (Model *m, std::string name) | |
| void | after_evaluate (DerivativeAccumulator *accpt) |
| Do post evaluation work if needed. More... | |
| void | before_evaluate () |
| Force update of the structure. More... | |
| bool | get_can_skip () const |
| Get whether this state can be skipped if its inputs/outputs didn't move. More... | |
| Public Member Functions inherited from IMP::ModelObject | |
| ModelObject (Model *m, std::string name) | |
| bool | get_has_dependencies () const |
| Return whether this object has dependencies computed. More... | |
| bool | get_has_required_score_states () const |
| Return whether score states are computed. More... | |
| ModelObjectsTemp | get_inputs () const |
| ModelObjectsTemps | get_interactions () const |
| Get the interacting sets induced by this ModelObject. More... | |
| Model * | get_model () const |
| ModelObjectsTemp | get_outputs () const |
| const ScoreStatesTemp & | get_required_score_states () const |
| Get the score states that are ancestors of this in the dependency graph. More... | |
| void | set_has_dependencies (bool tf) |
| Either invalidate the dependencies or ensure they are correct. More... | |
| void | set_has_required_score_states (bool tf) |
| Compute the required score states. More... | |
| Public Member Functions inherited from IMP::Object | |
| virtual void | clear_caches () |
| CheckLevel | get_check_level () const |
| LogLevel | get_log_level () const |
| void | set_check_level (CheckLevel l) |
| void | set_log_level (LogLevel l) |
| Set the logging level used in this object. More... | |
| void | set_was_used (bool tf) const |
| void | show (std::ostream &out=std::cout) const |
| const std::string & | get_name () const |
| void | set_name (std::string name) |
Protected Member Functions | |
| virtual ModelObjectsTemp | do_get_inputs () const |
| virtual ModelObjectsTemp | do_get_outputs () const |
| void | do_update_attributes () |
| void | do_update_derivatives (DerivativeAccumulator *da) |
| Protected Member Functions inherited from IMP::ScoreState | |
| void | set_can_skip (bool can_skip) |
| Set whether we can skip during model evaluation if appropriate. More... | |
| Protected Member Functions inherited from IMP::ModelObject | |
| virtual ModelObjectsTemps | do_get_interactions () const |
| virtual void | handle_set_has_required_score_states (bool) |
| Protected Member Functions inherited from IMP::Object | |
| Object (std::string name) | |
| Construct an object with the given name. More... | |
| virtual void | do_destroy () |
| IMP::container::PairsConstraint::PairsConstraint | ( | PairModifier * | before, |
| PairModifier * | after, | ||
| PairContainerAdaptor | c, | ||
| std::string | name = "PairsConstraint %1%" |
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| ) |
| [in] | c | The Container to hold the elements to process |
| [in] | before | The PairModifier to apply to all elements before evaluate. |
| [in] | after | The PairModifier to apply to all elements after evaluate. |
| [in] | name | The object name |
Definition at line 67 of file PairsConstraint.h.
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protectedvirtual |
Get any Particle, Container or other ModelObjects read by this during evaluation. If you read everything in a container, you can just return that container.
Implements IMP::ModelObject.
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protectedvirtual |
Get any Particle, Container or other ModelObjects changed by this during evaluation. This is only useful for ScoreStates, at the moment.
Implements IMP::ModelObject.
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overridevirtual |
Get information about the module and version of the object.
Reimplemented from IMP::Object.
Definition at line 80 of file PairsConstraint.h.