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IMP Reference Guide  2.20.0
The Integrative Modeling Platform
ParabolicFit.h
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1 /**
2  * \file IMP/algebra/ParabolicFit.h
3  * \brief Fit data with parabola
4  *
5  * Copyright 2007-2022 IMP Inventors. All rights reserved.
6  *
7  */
8 
9 #ifndef IMPALGEBRA_PARABOLIC_FIT_H
10 #define IMPALGEBRA_PARABOLIC_FIT_H
11 
12 #include "Vector2D.h"
13 #include "GeometricPrimitiveD.h"
14 #include <cereal/access.hpp>
15 #include <vector>
16 
17 IMPALGEBRA_BEGIN_NAMESPACE
18 
19 //! Calculate parabola that fits best the input data points
20 class IMPALGEBRAEXPORT ParabolicFit2D : public GeometricPrimitiveD<2> {
21  public:
22  ParabolicFit2D() {}
23 
24  //! Constructor
25  /**
26  \param[in] data vector of pairs (VectorD<2>) with x and their
27  corresponding y values
28  */
29  ParabolicFit2D(const Vector2Ds& data);
30 
31  //! fit error
32  double get_fit_error() const { return error_; }
33 
34  //! get a value (a*x^2)
35  double get_a() const { return a_; }
36 
37  //! get b value (b*x)
38  double get_b() const { return b_; }
39 
40  //! get c value (constant)
41  double get_c() const { return c_; }
42 
44  out << "y = " << a_ << "x^2 + " << b_ << "x + " << c_ << std::endl;
45  out << "Error = " << error_ << std::endl;
46  });
47 
48  private:
49  void find_regression(const Vector2Ds& data);
50  void evaluate_error(const Vector2Ds& data);
51 
52  private:
53  double a_, b_, c_;
54  double error_;
55 
56  friend class cereal::access;
57 
58  template<class Archive> void serialize(Archive &ar) {
59  ar(a_, b_, c_, error_);
60  }
61 };
62 
64 #ifndef IMP_DOXYGEN
65 typedef ParabolicFit2D ParabolicFit;
66 #endif
67 
68 IMPALGEBRA_END_NAMESPACE
69 
70 #endif /* IMPALGEBRA_PARABOLIC_FIT_H */
Base class for geometric types.
double get_b() const
get b value (b*x)
Definition: ParabolicFit.h:38
#define IMP_SHOWABLE_INLINE(Name, how_to_show)
Declare the methods needed by an object that can be printed.
Simple 2D vector class.
Calculate parabola that fits best the input data points.
Definition: ParabolicFit.h:20
Vector< VectorD< 2 > > Vector2Ds
Definition: VectorD.h:423
#define IMP_VALUES(Name, PluralName)
Define the type for storing sets of values.
Definition: value_macros.h:23
Base class for geometric types.
double get_c() const
get c value (constant)
Definition: ParabolicFit.h:41
double get_fit_error() const
fit error
Definition: ParabolicFit.h:32
double get_a() const
get a value (a*x^2)
Definition: ParabolicFit.h:35