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IMP Reference Guide  develop.d97d4ead1f,2024/11/21
The Integrative Modeling Platform
version 20241121.develop.d97d4ead1f
spb.h
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1 /**
2  * \file IMP/spb.h
3  * \brief Include all non-deprecated headers in IMP.spb.
4  *
5  * Copyright 2007-2024 IMP Inventors. All rights reserved.
6  */
7 
8 #ifndef IMP_SPB_H
9 #define IMP_SPB_H
10 #include <IMP/spb/AttributeDistancePairScore.h>
11 #include <IMP/spb/BoxedMover.h>
12 #include <IMP/spb/CellMover.h>
13 #include <IMP/spb/ChiSquareMetric.h>
14 #include <IMP/spb/ContactMapMetric.h>
15 #include <IMP/spb/DiameterRgyrRestraint.h>
16 #include <IMP/spb/DistanceRMSDMetric.h>
17 #include <IMP/spb/DistanceTerminiRestraint.h>
18 #include <IMP/spb/EM2DRestraint.h>
19 #include <IMP/spb/Gaussian.h>
20 #include <IMP/spb/HelixDecorator.h>
21 #include <IMP/spb/ISDRestraint.h>
22 #include <IMP/spb/KinkPairScore.h>
23 #include <IMP/spb/MolecularDynamicsWithWte.h>
24 #include <IMP/spb/MonteCarloWithWte.h>
25 #include <IMP/spb/NuisanceRangeModifier.h>
26 #include <IMP/spb/PbcBoxedMover.h>
27 #include <IMP/spb/PbcBoxedRigidBodyMover.h>
28 #include <IMP/spb/RMSDMetric.h>
29 #include <IMP/spb/RigidBodyNewMover.h>
30 #include <IMP/spb/RigidBodyPackingScore.h>
31 #include <IMP/spb/SameParticlePairFilter.h>
32 #include <IMP/spb/SameRigidBodyPairFilter.h>
33 #include <IMP/spb/TiltSingletonScore.h>
34 #include <IMP/spb/TransformationSymmetry.h>
35 #include <IMP/spb/TwoStateGoModelRestraint.h>
36 #include <IMP/spb/UniformBoundedRestraint.h>
37 #include <IMP/spb/pt_stuff.h>
38 #include <IMP/spb/spb_ISD_particles.h>
39 #include <IMP/spb/spb_assemble_restraints.h>
40 #include <IMP/spb/spb_main.h>
41 #include <IMP/spb/spb_parser.h>
42 #include <IMP/spb/spb_representation.h>
43 #include <IMP/spb/spb_restraint.h>
44 #include <IMP/spb/spb_sampler.h>
45 #endif /* IMP_SPB_H */
spb_assemble_restraints.h
Assemble SPB restraints.
ContactMapMetric.h
Contact Map Metric.
spb_sampler.h
SPB Sampler.
RigidBodyNewMover.h
A mover that transform a rigid body.
SameRigidBodyPairFilter.h
A Score on the distance between a pair of particles.
HelixDecorator.h
Add helix parameters to a particle.
spb_restraint.h
SPB Restraints.
spb_representation.h
SPB Representation.
Gaussian.h
Gaussian function.
SameParticlePairFilter.h
A Score on the distance between a pair of particles.
DistanceTerminiRestraint.h
A distance restraint between protein termini.
BoxedMover.h
A mover that keeps a particle in a box.
PbcBoxedRigidBodyMover.h
A mover that transform a rigid body.
AttributeDistancePairScore.h
A score based on the unmodified value of an attribute.
EM2DRestraint.h
A restraint for using EM2D cross-corr in a Bayesian way.
MolecularDynamicsWithWte.h
Simple molecular dynamics optimizer.
pt_stuff.h
Useful stuff for parallel tempering.
CellMover.h
A mover that transform a rigid body.
DiameterRgyrRestraint.h
Diameter Restraint.
TransformationSymmetry.h
Implement various types of symmetry.
ISDRestraint.h
A lognormal restraint that uses the ISPA model to model NOE-derived distance fit. ...
TwoStateGoModelRestraint.h
Two-state Go-Model Restraint.
TiltSingletonScore.h
A Score on the distance to a fixed point.
RMSDMetric.h
Distance RMSD Metric.
NuisanceRangeModifier.h
Ensure that a Nuisance stays within its set range.
ChiSquareMetric.h
Contact Map Metric.
RigidBodyPackingScore.h
A Score on the crossing angle between two rigid bodies.
spb_parser.h
SPB Parser.
spb_main.h
SPB MonteCarlo.
KinkPairScore.h
A Score on the crossing angle between two rigid bodies.
spb_ISD_particles.h
SPB ISD particles.
DistanceRMSDMetric.h
Distance RMSD Metric.
UniformBoundedRestraint.h
A uniform bounded restraint.
PbcBoxedMover.h
A mover that keeps a particle in a box.
MonteCarloWithWte.h
An exotic version of MonteCarlo.