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IMP Reference Guide  develop.182d9373c4,2021/04/12
The Integrative Modeling Platform
IMP::statistics::RecursivePartitionalClusteringMetric Class Reference

Represent a metric for clustering data that has already been clustered once. More...

#include <IMP/statistics/RecursivePartitionalClusteringMetric.h>

+ Inheritance diagram for IMP::statistics::RecursivePartitionalClusteringMetric:

Detailed Description

Represent a metric for clustering data that has already been clustered once.

To use it, cluster things once, then create one of these with the metric you want (created with the original data). When you pass this metric to the clustering algorithm, it will cluster the centers. You can extract the clustering of the original elements using create_full_clustering().

Definition at line 25 of file RecursivePartitionalClusteringMetric.h.

Public Member Functions

 RecursivePartitionalClusteringMetric (Metric *metric, PartitionalClustering *clustering)
 
PartitionalClusteringcreate_full_clustering (PartitionalClustering *center_cluster)
 
double get_distance (unsigned int i, unsigned int j) const
 
unsigned int get_number_of_items () const
 
virtual std::string get_type_name () const
 
virtual ::IMP::VersionInfo get_version_info () const
 Get information about the module and version of the object. More...
 
- Public Member Functions inherited from IMP::statistics::Metric
double get_weight (unsigned int i) const
 Return a weight for the point. More...
 
- Public Member Functions inherited from IMP::Object
virtual void clear_caches ()
 
CheckLevel get_check_level () const
 
LogLevel get_log_level () const
 
void set_check_level (CheckLevel l)
 
void set_log_level (LogLevel l)
 Set the logging level used in this object. More...
 
void set_was_used (bool tf) const
 
void show (std::ostream &out=std::cout) const
 
const std::string & get_name () const
 
void set_name (std::string name)
 

Additional Inherited Members

- Protected Member Functions inherited from IMP::statistics::Metric
 Metric (std::string name)
 
virtual double do_get_weight (unsigned int i) const
 By default return 1.0. More...
 
- Protected Member Functions inherited from IMP::Object
 Object (std::string name)
 Construct an object with the given name. More...
 
virtual void do_destroy ()
 

Member Function Documentation

virtual ::IMP::VersionInfo IMP::statistics::RecursivePartitionalClusteringMetric::get_version_info ( ) const
virtual

Get information about the module and version of the object.

Reimplemented from IMP::Object.

Definition at line 36 of file RecursivePartitionalClusteringMetric.h.


The documentation for this class was generated from the following file: