IMP Reference Guide
develop.f6c15b4169,2024/11/06
The Integrative Modeling Platform
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#include <IMP/statistics/PartitionalClusteringWithCenter.h>
In addition to the information in the Clustering base class, PartitionalClusteringWithCenter stores a cluster center for each cluster. The cluster center is a point in the space defined by the embedding.
The representative for each cluster is the member whose location in the embedding is closest to the cluster center.
Definition at line 25 of file PartitionalClusteringWithCenter.h.
Public Member Functions | |
const Ints & | get_cluster (unsigned int i) const override |
Return the list of indexes in the ith cluster. More... | |
const algebra::VectorKD & | get_cluster_center (unsigned int i) const |
int | get_cluster_representative (unsigned int i) const override |
Return the index of an item that "typifies" the ith cluster. More... | |
unsigned int | get_number_of_clusters () const override |
virtual std::string | get_type_name () const override |
virtual ::IMP::VersionInfo | get_version_info () const override |
Get information about the module and version of the object. More... | |
Public Member Functions inherited from IMP::statistics::PartitionalClustering | |
PartitionalClustering (std::string name) | |
Public Member Functions inherited from IMP::Object | |
virtual void | clear_caches () |
CheckLevel | get_check_level () const |
LogLevel | get_log_level () const |
void | set_check_level (CheckLevel l) |
void | set_log_level (LogLevel l) |
Set the logging level used in this object. More... | |
void | set_was_used (bool tf) const |
void | show (std::ostream &out=std::cout) const |
const std::string & | get_name () const |
void | set_name (std::string name) |
Additional Inherited Members | |
Protected Member Functions inherited from IMP::Object | |
Object (std::string name) | |
Construct an object with the given name. More... | |
virtual void | do_destroy () |
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overridevirtual |
Return the list of indexes in the ith cluster.
Implements IMP::statistics::PartitionalClustering.
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overridevirtual |
Return the index of an item that "typifies" the ith cluster.
Implements IMP::statistics::PartitionalClustering.
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overridevirtual |
Get information about the module and version of the object.
Reimplemented from IMP::Object.
Definition at line 53 of file PartitionalClusteringWithCenter.h.