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IMP Reference Guide  develop.f6c15b4169,2024/11/06
The Integrative Modeling Platform
IMP::statistics::PartitionalClusteringWithCenter Class Reference

#include <IMP/statistics/PartitionalClusteringWithCenter.h>

+ Inheritance diagram for IMP::statistics::PartitionalClusteringWithCenter:

Detailed Description

In addition to the information in the Clustering base class, PartitionalClusteringWithCenter stores a cluster center for each cluster. The cluster center is a point in the space defined by the embedding.

The representative for each cluster is the member whose location in the embedding is closest to the cluster center.

Definition at line 25 of file PartitionalClusteringWithCenter.h.

Public Member Functions

const Intsget_cluster (unsigned int i) const override
 Return the list of indexes in the ith cluster. More...
 
const algebra::VectorKDget_cluster_center (unsigned int i) const
 
int get_cluster_representative (unsigned int i) const override
 Return the index of an item that "typifies" the ith cluster. More...
 
unsigned int get_number_of_clusters () const override
 
virtual std::string get_type_name () const override
 
virtual ::IMP::VersionInfo get_version_info () const override
 Get information about the module and version of the object. More...
 
- Public Member Functions inherited from IMP::statistics::PartitionalClustering
 PartitionalClustering (std::string name)
 
- Public Member Functions inherited from IMP::Object
virtual void clear_caches ()
 
CheckLevel get_check_level () const
 
LogLevel get_log_level () const
 
void set_check_level (CheckLevel l)
 
void set_log_level (LogLevel l)
 Set the logging level used in this object. More...
 
void set_was_used (bool tf) const
 
void show (std::ostream &out=std::cout) const
 
const std::string & get_name () const
 
void set_name (std::string name)
 

Additional Inherited Members

- Protected Member Functions inherited from IMP::Object
 Object (std::string name)
 Construct an object with the given name. More...
 
virtual void do_destroy ()
 

Member Function Documentation

const Ints& IMP::statistics::PartitionalClusteringWithCenter::get_cluster ( unsigned int  cluster_index) const
overridevirtual

Return the list of indexes in the ith cluster.

Implements IMP::statistics::PartitionalClustering.

int IMP::statistics::PartitionalClusteringWithCenter::get_cluster_representative ( unsigned int  cluster_index) const
overridevirtual

Return the index of an item that "typifies" the ith cluster.

Implements IMP::statistics::PartitionalClustering.

virtual ::IMP::VersionInfo IMP::statistics::PartitionalClusteringWithCenter::get_version_info ( ) const
overridevirtual

Get information about the module and version of the object.

Reimplemented from IMP::Object.

Definition at line 53 of file PartitionalClusteringWithCenter.h.


The documentation for this class was generated from the following file: