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IMP Reference Guide  develop.182d9373c4,2021/04/12
The Integrative Modeling Platform
IMP::statistics::HistogramD< D, Grid > Class Template Reference

Dynamically build a histogram embedded in D-dimensional space. More...

#include <IMP/statistics/HistogramD.h>

+ Inheritance diagram for IMP::statistics::HistogramD< D, Grid >:

Detailed Description

template<int D, class Grid = algebra::GridD< D, typename algebra::DenseGridStorageD<D, double>, double, typename algebra::DefaultEmbeddingD<D> >>
class IMP::statistics::HistogramD< D, Grid >

Dynamically build a histogram embedded in D-dimensional space.

Definition at line 27 of file HistogramD.h.

Public Types

typedef Grid CountGrid
 

Public Member Functions

 HistogramD (double voxel_size, const algebra::BoundingBoxD< D > &bb)
 
void add (const algebra::VectorD< D > &x, double weight=1)
 
algebra::BoundingBoxD< D > get_bounding_box () const
 
const CountGrid & get_counts () const
 
unsigned int get_dimension () const
 
HistogramD< D > get_frequencies () const
 
algebra::VectorD< D > get_mean () const
 
FloatPair get_minimum_and_maximum () const
 
HistogramD< D > get_probability_distribution_function () const
 
algebra::VectorD< D > get_standard_deviation (const algebra::VectorD< D > &mean) const
 
double get_total_count () const
 Get the sum of all counts in the histogram. More...
 
void show (std::ostream &out=std::cout) const
 

Member Function Documentation

template<int D, class Grid = algebra::GridD< D, typename algebra::DenseGridStorageD<D, double>, double, typename algebra::DefaultEmbeddingD<D> >>
void IMP::statistics::HistogramD< D, Grid >::add ( const algebra::VectorD< D > &  x,
double  weight = 1 
)

Increase the count for the bin that holds a value that is in range for this histogram.

Definition at line 35 of file HistogramD.h.

template<int D, class Grid = algebra::GridD< D, typename algebra::DenseGridStorageD<D, double>, double, typename algebra::DefaultEmbeddingD<D> >>
HistogramD<D> IMP::statistics::HistogramD< D, Grid >::get_probability_distribution_function ( ) const

Get a histogram that has the pdf value as the value for the bin.

Definition at line 53 of file HistogramD.h.

+ Here is the call graph for this function:

template<int D, class Grid = algebra::GridD< D, typename algebra::DenseGridStorageD<D, double>, double, typename algebra::DefaultEmbeddingD<D> >>
double IMP::statistics::HistogramD< D, Grid >::get_total_count ( ) const

Get the sum of all counts in the histogram.

Definition at line 45 of file HistogramD.h.


The documentation for this class was generated from the following file: