Detailed Description

Select good-scoring models based on scores and/or data satisfaction.

Exrtact the corresponding RMFs and put them in a separate directory

Public Member Functions
def	__init__
	Constructor. More...

def	get_good_scoring_models
	Loops over all stat files in the run directory and populates the list of good-scoring models. More...

Constructor & Destructor Documentation

def IMP.sampcon.good_scoring_model_selector.GoodScoringModelSelector.__init__	(	self,
		run_directory,
		run_prefix
	)

Constructor.

Parameters

run_directory	the directory containing subdirectories of runs
run_prefix	the prefix for each run directory. For e.g. if the subdirectories are modeling_run1, modeling_run2, etc. the prefix is modeling_run

def IMP.sampcon.good_scoring_model_selector.GoodScoringModelSelector.get_good_scoring_models	(	self,
		selection_keywords_list = `[]`,
		printing_keywords_list = `[]`,
		aggregate_lower_thresholds = `[]`,
		aggregate_upper_thresholds = `[]`,
		member_lower_thresholds = `[]`,
		member_upper_thresholds = `[]`,
		extract = `False`
	)

Loops over all stat files in the run directory and populates the list of good-scoring models.

Parameters

selection_keywords_list	is the list of keywords in the PMI stat file that need to be checked for each datatype/score in the criteria list
printing_keywords_list	is the list of keywords in the PMI stat file whose values needs to be printed for selected models
aggregate_lower_thresholds	The list of lower bounds on the values corresponding to fields in the criteria_list. Aggregates are used for terms like % of crosslink satisfaction and thresholds of score terms
aggregate_upper_thresholds	The list of upper bounds on the values corresponding to fields in the criteria_list. Aggregates are used for terms like % of crosslink satisfaction and thresholds of score terms
member_lower_thresholds	The list of lower bounds for values of subcomponents of an aggregate term. E.g. for crosslink satisfaction the thresholds are on distances for each individual crosslink. For score terms this can be ignored since thresholds are mentioned in the aggregate fields.
member_upper_thresholds	The list of upper bounds for values of subcomponents of an aggregate term. E.g. for crosslink satisfaction the thresholds are on distances for each individual crosslink. For score terms this can be ignored since thresholds are mentioned in the aggregate fields.

The documentation for this class was generated from the following file: