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IMP Reference Guide  develop.716bca0a46,2020/04/04
The Integrative Modeling Platform
IMP::rmf::SaveOptimizerState Class Reference

Periodically dump the state of all associated objects into the RMF file. More...

#include <IMP/rmf/SaveOptimizerState.h>

+ Inheritance diagram for IMP::rmf::SaveOptimizerState:

Detailed Description

Periodically dump the state of all associated objects into the RMF file.

This is done by calling the save_frame() function. Convenience methods are provided to add hierarchies, restraints, particles, and geometries.

Definition at line 26 of file SaveOptimizerState.h.

Public Member Functions

 SaveOptimizerState (Model *m, RMF::FileHandle fh)
 
virtual void do_update (unsigned int call_num)
 
virtual std::string get_type_name () const
 
virtual ::IMP::VersionInfo get_version_info () const
 Get information about the module and version of the object. More...
 
void set_simulator (atom::Simulator *sim)
 Use the simulator to tag frames with current time. More...
 
void update_always (std::string name)
 Write a frame with a given name. More...
 
void update_always ()
 
- Public Member Functions inherited from IMP::OptimizerState
 OptimizerState (Model *m, std::string name)
 Constructor. More...
 
unsigned int get_number_of_updates () const
 Return the number of times do_update() has been called. More...
 
Optimizerget_optimizer () const
 
unsigned int get_period () const
 Get the periodicity of this state. More...
 
virtual void reset ()
 Reset counters, as if at the start of an optimize run. More...
 
virtual void set_is_optimizing (bool)
 Called by an Optimizer to signal begin/end of an optimize run. More...
 
void set_number_of_updates (unsigned int n)
 Set the counter of number of times do_update() has been called. More...
 
void set_period (unsigned int p)
 Set the periodicity of this state. More...
 
virtual void update ()
 Called when the Optimizer accepts a new conformation. More...
 
void update_always ()
 Force the state to perform its action now, ignoring the periodicity. More...
 
- Public Member Functions inherited from IMP::ModelObject
 ModelObject (Model *m, std::string name)
 
bool get_has_dependencies () const
 Return whether this object has dependencies computed. More...
 
bool get_has_required_score_states () const
 Return whether score states are computed. More...
 
ModelObjectsTemp get_inputs () const
 
ModelObjectsTemps get_interactions () const
 Get the interacting sets induced by this ModelObject. More...
 
Modelget_model () const
 
ModelObjectsTemp get_outputs () const
 
const ScoreStatesTempget_required_score_states () const
 Get the score states that are ancestors of this in the dependency graph. More...
 
void set_has_dependencies (bool tf)
 Either invalidate the dependencies or ensure they are correct. More...
 
void set_has_required_score_states (bool tf)
 Compute the required score states. More...
 
- Public Member Functions inherited from IMP::Object
virtual void clear_caches ()
 
CheckLevel get_check_level () const
 
LogLevel get_log_level () const
 
void set_check_level (CheckLevel l)
 
void set_log_level (LogLevel l)
 Set the logging level used in this object. More...
 
void set_was_used (bool tf) const
 
void show (std::ostream &out=std::cout) const
 
const std::string & get_name () const
 
void set_name (std::string name)
 

Additional Inherited Members

- Protected Member Functions inherited from IMP::OptimizerState
virtual ModelObjectsTemp do_get_inputs () const
 
virtual ModelObjectsTemp do_get_outputs () const
 
virtual void do_set_is_optimizing (bool)
 
- Protected Member Functions inherited from IMP::ModelObject
virtual ModelObjectsTemps do_get_interactions () const
 
virtual void handle_set_has_required_score_states (bool)
 
- Protected Member Functions inherited from IMP::Object
 Object (std::string name)
 Construct an object with the given name. More...
 
virtual void do_destroy ()
 

Member Function Documentation

virtual void IMP::rmf::SaveOptimizerState::do_update ( unsigned int  )
virtual

This method is called every get_period() update calls. The number of times this method has been called since the last reset or start of the optimization run is passed.

Reimplemented from IMP::OptimizerState.

virtual ::IMP::VersionInfo IMP::rmf::SaveOptimizerState::get_version_info ( ) const
virtual

Get information about the module and version of the object.

Reimplemented from IMP::Object.

Definition at line 56 of file SaveOptimizerState.h.

void IMP::rmf::SaveOptimizerState::set_simulator ( atom::Simulator sim)

Use the simulator to tag frames with current time.

Note
This may change to a more general mechanism at some point in the future.
void IMP::rmf::SaveOptimizerState::update_always ( std::string  name)

Write a frame with a given name.


The documentation for this class was generated from the following file: