IMP Reference Guide  develop.e6c37e56ed,2022/01/25 The Integrative Modeling Platform
IMP.pmi1.mmcif.Entity Class Reference

A single entity in the system. More...

Inherits Entity.

## Detailed Description

A single entity in the system.

This functions identically to the base ihm.Entity class, but it allows identifying residues by either the IHM numbering scheme (seq_id, which is always contiguous starting at 1) or by the PMI scheme (which is similar, but may not start at 1 if the sequence in the FASTA file has one or more N-terminal gaps

Note
This class is only available in Python.

Definition at line 1069 of file /mmcif.py.

## Public Member Functions

def pmi_range
Return a range of IHM residues indexed using PMI numbering. More...

def pmi_residue
Return a single IHM residue indexed using PMI numbering. More...

## Member Function Documentation

 def IMP.pmi1.mmcif.Entity.pmi_range ( self, res_id_begin, res_id_end )

Return a range of IHM residues indexed using PMI numbering.

Definition at line 1086 of file /mmcif.py.

 def IMP.pmi1.mmcif.Entity.pmi_residue ( self, res_id )

Return a single IHM residue indexed using PMI numbering.

Definition at line 1082 of file /mmcif.py.

The documentation for this class was generated from the following file: