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IMP Reference Guide
develop.63b38c487d,2024/12/21
The Integrative Modeling Platform
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This is the complete list of members for IMP::misc::CustomXYZR, including all inherited members.
| add_to_derivative(int i, Float v, DerivativeAccumulator &d) | IMP::core::XYZ | |
| add_to_derivatives(const algebra::Vector3D &v, DerivativeAccumulator &d) | IMP::core::XYZ | |
| add_to_radius_derivative(double v, DerivativeAccumulator &d) (defined in IMP::misc::CustomXYZR) | IMP::misc::CustomXYZR | |
| CustomXYZR() (defined in IMP::misc::CustomXYZR) | IMP::misc::CustomXYZR | |
| CustomXYZR(::IMP::Model *m,::IMP::ParticleIndex id, const FloatKey &tr=IMP::core::XYZR::get_radius_key()) (defined in IMP::misc::CustomXYZR) | IMP::misc::CustomXYZR | |
| CustomXYZR(const IMP::ParticleAdaptor &d, const FloatKey &tr=IMP::core::XYZR::get_radius_key()) (defined in IMP::misc::CustomXYZR) | IMP::misc::CustomXYZR | explicit |
| Decorator(Model *m, ParticleIndex pi) (defined in IMP::Decorator) | IMP::Decorator | protected |
| Decorator() (defined in IMP::Decorator) | IMP::Decorator | protected |
| Decorator(ParticleAdaptor p) (defined in IMP::Decorator) | IMP::Decorator | explicitprotected |
| DecoratorTraits typedef (defined in IMP::misc::CustomXYZR) | IMP::misc::CustomXYZR | |
| get_coordinate(int i) const | IMP::core::XYZ | |
| get_coordinate_key(unsigned int i) (defined in IMP::core::XYZ) | IMP::core::XYZ | static |
| get_coordinates() const | IMP::core::XYZ | |
| get_coordinates_are_optimized() const | IMP::core::XYZ | |
| get_decorator_traits() const (defined in IMP::misc::CustomXYZR) | IMP::misc::CustomXYZR | |
| get_default_decorator_traits() (defined in IMP::misc::CustomXYZR) | IMP::misc::CustomXYZR | static |
| get_default_radius_key() | IMP::misc::CustomXYZR | static |
| get_derivative(int i) const | IMP::core::XYZ | |
| get_derivatives() const | IMP::core::XYZ | |
| get_is_setup(const IMP::ParticleAdaptor &p, const FloatKey &tr=IMP::core::XYZR::get_radius_key()) (defined in IMP::misc::CustomXYZR) | IMP::misc::CustomXYZR | static |
| get_is_setup(Model *m, ParticleIndex pi, FloatKey radius_key=get_default_radius_key()) | IMP::misc::CustomXYZR | static |
| get_is_setup(const IMP::ParticleAdaptor &p) (defined in IMP::core::XYZ) | IMP::core::XYZ | static |
| get_is_setup(Model *m, ParticleIndex pi) (defined in IMP::core::XYZ) | IMP::core::XYZ | static |
| get_is_valid() const | IMP::Decorator | |
| get_model() const | IMP::Decorator | |
| get_particle() const | IMP::Decorator | |
| get_particle_index() const | IMP::Decorator | |
| get_radius() const | IMP::misc::CustomXYZR | |
| get_sphere() const | IMP::misc::CustomXYZR | |
| get_traits() (defined in IMP::misc::CustomXYZR) | IMP::misc::CustomXYZR | |
| get_vector_to(const XYZ &b) const | IMP::core::XYZ | |
| get_x() const | IMP::core::XYZ | |
| get_xyz_keys() | IMP::core::XYZ | static |
| get_y() const | IMP::core::XYZ | |
| get_z() const | IMP::core::XYZ | |
| operator Particle *() const (defined in IMP::Decorator) | IMP::Decorator | |
| operator ParticleIndex() const (defined in IMP::Decorator) | IMP::Decorator | |
| operator->() const (defined in IMP::Decorator) | IMP::Decorator | |
| set_coordinate(unsigned int i, Float v) | IMP::core::XYZ | |
| set_coordinates(const algebra::Vector3D &v) | IMP::core::XYZ | |
| set_coordinates_are_optimized(bool tf) const | IMP::core::XYZ | |
| set_radius(Float t) | IMP::misc::CustomXYZR | |
| set_sphere(const algebra::Sphere3D &s) | IMP::misc::CustomXYZR | |
| set_x(Float t) | IMP::core::XYZ | |
| set_y(Float t) | IMP::core::XYZ | |
| set_z(Float t) | IMP::core::XYZ | |
| setup_particle(Model *m, ParticleIndex pi, DecoratorTraits tr=get_default_decorator_traits()) | IMP::misc::CustomXYZR | static |
| setup_particle(IMP::ParticleAdaptor d, DecoratorTraits tr=get_default_decorator_traits()) (defined in IMP::misc::CustomXYZR) | IMP::misc::CustomXYZR | static |
| setup_particle(Model *m, ParticleIndex pi, double radius, DecoratorTraits tr=get_default_decorator_traits()) (defined in IMP::misc::CustomXYZR) | IMP::misc::CustomXYZR | static |
| setup_particle(IMP::ParticleAdaptor d, double radius, DecoratorTraits tr=get_default_decorator_traits()) (defined in IMP::misc::CustomXYZR) | IMP::misc::CustomXYZR | static |
| setup_particle(Model *m, ParticleIndex pi, algebra::Sphere3D ball, DecoratorTraits tr=get_default_decorator_traits()) (defined in IMP::misc::CustomXYZR) | IMP::misc::CustomXYZR | static |
| setup_particle(IMP::ParticleAdaptor d, algebra::Sphere3D ball, DecoratorTraits tr=get_default_decorator_traits()) (defined in IMP::misc::CustomXYZR) | IMP::misc::CustomXYZR | static |
| IMP::core::XYZ::setup_particle(Model *m, ParticleIndex pi) | IMP::core::XYZ | static |
| IMP::core::XYZ::setup_particle(IMP::ParticleAdaptor pa) | IMP::core::XYZ | static |
| IMP::core::XYZ::setup_particle(Model *m, ParticleIndex pi, algebra::Vector3D v) | IMP::core::XYZ | static |
| IMP::core::XYZ::setup_particle(IMP::ParticleAdaptor pa, algebra::Vector3D v) | IMP::core::XYZ | static |
| show(std::ostream &out=std::cout) const (defined in IMP::misc::CustomXYZR) | IMP::misc::CustomXYZR | |
| Value() (defined in IMP::Value) | IMP::Value | protected |
| XYZ() (defined in IMP::core::XYZ) | IMP::core::XYZ | |
| XYZ(::IMP::Model *m,::IMP::ParticleIndex id) (defined in IMP::core::XYZ) | IMP::core::XYZ | |
| XYZ(const IMP::ParticleAdaptor &d) (defined in IMP::core::XYZ) | IMP::core::XYZ | explicit |