IMP Reference Guide
develop.f6c15b4169,2024/11/06
The Integrative Modeling Platform
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#include <IMP/em/embedding.h>
Generate a set of points from the voxels in a em::DensityMap which are above a certain threshold.
Definition at line 21 of file em/embedding.h.
Public Member Functions | |
HighDensityEmbedding (DensityMap *dm, double threshold) | |
unsigned int | get_number_of_items () const override |
algebra::VectorKD | get_point (unsigned int i) const override |
virtual std::string | get_type_name () const override |
virtual ::IMP::VersionInfo | get_version_info () const override |
Get information about the module and version of the object. More... | |
Public Member Functions inherited from IMP::statistics::Embedding | |
virtual algebra::VectorKDs | get_points () const |
double | get_weight (unsigned int i) const |
Return a weight for the point. More... | |
Public Member Functions inherited from IMP::Object | |
virtual void | clear_caches () |
CheckLevel | get_check_level () const |
LogLevel | get_log_level () const |
void | set_check_level (CheckLevel l) |
void | set_log_level (LogLevel l) |
Set the logging level used in this object. More... | |
void | set_was_used (bool tf) const |
void | show (std::ostream &out=std::cout) const |
const std::string & | get_name () const |
void | set_name (std::string name) |
Additional Inherited Members | |
Protected Member Functions inherited from IMP::statistics::Embedding | |
Embedding (std::string name) | |
virtual double | do_get_weight (unsigned int i) const |
By default return 1.0. More... | |
Protected Member Functions inherited from IMP::Object | |
Object (std::string name) | |
Construct an object with the given name. More... | |
virtual void | do_destroy () |
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overridevirtual |
Get information about the module and version of the object.
Reimplemented from IMP::Object.
Definition at line 28 of file em/embedding.h.