Detailed Description

Generate a set of points from the voxels in a em::DensityMap which are above a certain threshold.

Definition at line 21 of file em/embedding.h.

Public Member Functions
	HighDensityEmbedding (DensityMap *dm, double threshold)

unsigned int	get_number_of_items () const override

algebra::VectorKD	get_point (unsigned int i) const override

virtual std::string	get_type_name () const override

virtual ::IMP::VersionInfo	get_version_info () const override
	Get information about the module and version of the object. More...

Public Member Functions inherited from IMP::statistics::Embedding
virtual algebra::VectorKDs	get_points () const

double	get_weight (unsigned int i) const
	Return a weight for the point. More...

Public Member Functions inherited from IMP::Object
virtual void	clear_caches ()

CheckLevel	get_check_level () const

LogLevel	get_log_level () const

void	set_check_level (CheckLevel l)

void	set_log_level (LogLevel l)
	Set the logging level used in this object. More...

void	set_was_used (bool tf) const

void	show (std::ostream &out=std::cout) const

const std::string &	get_name () const

void	set_name (std::string name)

Additional Inherited Members
Protected Member Functions inherited from IMP::statistics::Embedding
	Embedding (std::string name)

virtual double	do_get_weight (unsigned int i) const
	By default return 1.0. More...

Protected Member Functions inherited from IMP::Object
	Object (std::string name)
	Construct an object with the given name. More...

virtual void	do_destroy ()

Member Function Documentation

virtual ::IMP::VersionInfo IMP::em::HighDensityEmbedding::get_version_info ( ) const

overridevirtual

Get information about the module and version of the object.

Reimplemented from IMP::Object.

Definition at line 28 of file em/embedding.h.

The documentation for this class was generated from the following file: