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IMP Reference Guide  develop.af393bce43,2020/02/22
The Integrative Modeling Platform
IMP::em::HighDensityEmbedding Class Reference

#include <IMP/em/embedding.h>

+ Inheritance diagram for IMP::em::HighDensityEmbedding:

Detailed Description

Generate a set of points from the voxels in a em::DensityMap which are above a certain threshold.

Definition at line 21 of file em/embedding.h.

Public Member Functions

 HighDensityEmbedding (DensityMap *dm, double threshold)
 
unsigned int get_number_of_items () const
 
algebra::VectorKD get_point (unsigned int i) const
 
virtual std::string get_type_name () const
 
virtual ::IMP::VersionInfo get_version_info () const
 Get information about the module and version of the object. More...
 
- Public Member Functions inherited from IMP::statistics::Embedding
virtual algebra::VectorKDs get_points () const
 
double get_weight (unsigned int i) const
 Return a weight for the point. More...
 
- Public Member Functions inherited from IMP::Object
virtual void clear_caches ()
 
CheckLevel get_check_level () const
 
LogLevel get_log_level () const
 
void set_check_level (CheckLevel l)
 
void set_log_level (LogLevel l)
 Set the logging level used in this object. More...
 
void set_was_used (bool tf) const
 
void show (std::ostream &out=std::cout) const
 
const std::string & get_name () const
 
void set_name (std::string name)
 

Additional Inherited Members

- Protected Member Functions inherited from IMP::statistics::Embedding
 Embedding (std::string name)
 
virtual double do_get_weight (unsigned int i) const
 By default return 1.0. More...
 
- Protected Member Functions inherited from IMP::Object
 Object (std::string name)
 Construct an object with the given name. More...
 
virtual void do_destroy ()
 

Member Function Documentation

virtual ::IMP::VersionInfo IMP::em::HighDensityEmbedding::get_version_info ( ) const
virtual

Get information about the module and version of the object.

Reimplemented from IMP::Object.

Definition at line 28 of file em/embedding.h.


The documentation for this class was generated from the following file: