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IMP Reference Guide  develop.c9d213c767,2020/05/27
The Integrative Modeling Platform
IMP::domino::XYZStates Class Reference

#include <IMP/domino/particle_states.h>

+ Inheritance diagram for IMP::domino::XYZStates:

Detailed Description

Store a set of states which explicitly define the XYZ coordinates of the particle in question.

Definition at line 137 of file particle_states.h.

Public Member Functions

 XYZStates (const algebra::Vector3Ds &states)
 
algebra::VectorKD get_embedding (unsigned int i) const
 Return an embedding of the state. More...
 
unsigned int get_nearest_state (const algebra::VectorKD &v) const
 Return the state closest to a given embedding. More...
 
virtual unsigned int get_number_of_particle_states () const
 
virtual std::string get_type_name () const
 
algebra::Vector3D get_vector (unsigned int i) const
 
virtual ::IMP::VersionInfo get_version_info () const
 Get information about the module and version of the object. More...
 
virtual void load_particle_state (unsigned int, Particle *) const
 
- Public Member Functions inherited from IMP::domino::ParticleStates
 ParticleStates (std::string name="ParticleStates %1%")
 
- Public Member Functions inherited from IMP::Object
virtual void clear_caches ()
 
CheckLevel get_check_level () const
 
LogLevel get_log_level () const
 
void set_check_level (CheckLevel l)
 
void set_log_level (LogLevel l)
 Set the logging level used in this object. More...
 
void set_was_used (bool tf) const
 
void show (std::ostream &out=std::cout) const
 
const std::string & get_name () const
 
void set_name (std::string name)
 

Additional Inherited Members

- Protected Member Functions inherited from IMP::Object
 Object (std::string name)
 Construct an object with the given name. More...
 
virtual void do_destroy ()
 

Member Function Documentation

algebra::VectorKD IMP::domino::XYZStates::get_embedding ( unsigned int  i) const
virtual

Return an embedding of the state.

By default this just returns a 1D vector containing the index. The vector needs to have the same dimension for each value of i.

Reimplemented from IMP::domino::ParticleStates.

Definition at line 150 of file particle_states.h.

unsigned int IMP::domino::XYZStates::get_nearest_state ( const algebra::VectorKD v) const
virtual

Return the state closest to a given embedding.

Reimplemented from IMP::domino::ParticleStates.

Definition at line 154 of file particle_states.h.

virtual ::IMP::VersionInfo IMP::domino::XYZStates::get_version_info ( ) const
virtual

Get information about the module and version of the object.

Reimplemented from IMP::Object.

Definition at line 160 of file particle_states.h.


The documentation for this class was generated from the following file: