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IMP Reference Guide
develop.27926d84dc,2024/04/16
The Integrative Modeling Platform
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Define sets of equivalent particles. More...
#include <IMP/domino/subset_filters.h>
Inheritance diagram for IMP::domino::EquivalenceSubsetFilterTable:Define sets of equivalent particles.
Particles in an equivalency set are assumed to be equivalent under exchange. Given that, one should only generate each of the equivalent conformations once. More specifically, given equivalent particles p0 and p1, if p0 is given state s0 and p1 is given state s1, then p1 will never be given state s0 when p0 is given the state s1.
Definition at line 238 of file subset_filters.h.
Public Member Functions | |
| EquivalenceSubsetFilterTable (IMP::domino::ParticleStatesTable *pst) | |
| virtual double | get_strength (const IMP::domino::Subset &s, const IMP::domino::Subsets &excluded) const override |
| The strength is a rough metric of how this filter restricts the subset. More... | |
| virtual IMP::domino::SubsetFilter * | get_subset_filter (const IMP::domino::Subset &s, const IMP::domino::Subsets &excluded) const override |
| virtual std::string | get_type_name () const override |
| virtual ::IMP::VersionInfo | get_version_info () const override |
| Get information about the module and version of the object. More... | |
| Public Member Functions inherited from IMP::domino::DisjointSetsSubsetFilterTable | |
| void | add_pair (const ParticlePair &pp) |
| void | add_set (const ParticlesTemp &ps) |
| Public Member Functions inherited from IMP::domino::SubsetFilterTable | |
| SubsetFilterTable (std::string name="SubsetFilterTable%1%") | |
| Public Member Functions inherited from IMP::Object | |
| virtual void | clear_caches () |
| CheckLevel | get_check_level () const |
| LogLevel | get_log_level () const |
| void | set_check_level (CheckLevel l) |
| void | set_log_level (LogLevel l) |
| Set the logging level used in this object. More... | |
| void | set_was_used (bool tf) const |
| void | show (std::ostream &out=std::cout) const |
| const std::string & | get_name () const |
| void | set_name (std::string name) |
Additional Inherited Members | |
| Protected Member Functions inherited from IMP::domino::DisjointSetsSubsetFilterTable | |
| DisjointSetsSubsetFilterTable (ParticleStatesTable *pst, std::string name) | |
| DisjointSetsSubsetFilterTable (std::string name) | |
| unsigned int | get_number_of_sets () const |
| ParticlesTemp | get_set (unsigned int i) const |
| Protected Member Functions inherited from IMP::Object | |
| Object (std::string name) | |
| Construct an object with the given name. More... | |
| virtual void | do_destroy () |
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overridevirtual |
The strength is a rough metric of how this filter restricts the subset.
It is still kind of nebulous, but as a rough guide, it should be the fraction of the states that are eliminated by the filter.
Implements IMP::domino::SubsetFilterTable.
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overridevirtual |
Return a SubsetFilter which acts on the Subset s, given that all the prior_subsets have already been filtered. This should return nullptr if there is no filtering to be done.
Implements IMP::domino::SubsetFilterTable.
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overridevirtual |
Get information about the module and version of the object.
Reimplemented from IMP::Object.
Definition at line 238 of file subset_filters.h.