Robert,
You can fix the problem with IMP 1.0 by adding
%include "IMP/saxs/FormFactorTable.h"
into modules/saxs/pyext/swig.i-in
or alternatively update to more recent version. The FoXS web server
currently runs imp revision 7371, which was tested on saxs benchmark,
so I recommend updating to this one.
Dina
On Fri, Dec 10, 2010 at 9:50 AM, Ben Webb <> wrote:
> On 12/10/10 9:28 AM, Robert Brynmor Fenwick wrote:
>> This all works now. I have a further question. Has there been a change
>> in the position of the docs? I have just tried to run the example 2 on
>> this page:
>>
>> http://salilab.org/imp/nightly/doc/html/saxs_examples.html
>>
>> and there are two errors relating to the location of the example files.
>> These I can fix by hand coding the location of the files.
>
> The examples get installed along with the rest of IMP, so if you move
> IMP to a different location manually, it won't be able to find them any
> more.
>
>> I can not fix
>> the final problem:
>>
>> Traceback (most recent call last):
>> File "foxs_test.py", line 25, in <module>
>> ft = IMP.saxs.default_form_factor_table()
>> AttributeError: 'module' object has no attribute 'default_form_factor_table'
>
> I don't see that script on that page, nor is it part of IMP currently.
> If you're building the latest version of IMP checked out from SVN, then
> you should expect things to not work from time to time. Check the
> nightly build status page to see what's broken.
>
> If you're building IMP 1.0, then please refer to the 1.0 docs rather
> than those for the nightly build. There have been some changes which
> mean that example Python scripts for nightly and 1.0 are not
> interchangeable.
>
> Ben
> --
> http://salilab.org/~ben/
> "It is a capital mistake to theorize before one has data."
> - Sir Arthur Conan Doyle
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