IMP Reference Guide
2.20.2
The Integrative Modeling Platform
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Tools for clustering and cluster analysis. More...
Tools for clustering and cluster analysis.
Classes | |
class | Alignment |
Performs alignment and RMSD calculation for two sets of coordinates. More... | |
class | Clustering |
A class to cluster structures. More... | |
class | CrossLinkTable |
Visualization of crosslinks. More... | |
class | GetModelDensity |
Compute mean density maps from structures. More... | |
class | Precision |
A class to evaluate the precision of an ensemble. More... | |
class | RMSD |
Compute the RMSD (without alignment) taking into account the copy ambiguity. More... | |
Functions | |
def | get_particles_at_resolution_one |
Get particles at res 1, or any beads, based on the name. More... | |
def | get_particles_at_resolution_ten |
Get particles at res 10, or any beads, based on the name. More... | |
def IMP.pmi1.analysis.get_particles_at_resolution_one | ( | prot | ) |
Get particles at res 1, or any beads, based on the name.
No Representation is needed. This is mainly used when the hierarchy is read from an RMF file.
ote If the root node is named "System" or is a "State", do proper selection.
Definition at line 1575 of file pmi1/Analysis.py.
def IMP.pmi1.analysis.get_particles_at_resolution_ten | ( | prot | ) |
Get particles at res 10, or any beads, based on the name.
No Representation is needed. This is mainly used when the hierarchy is read from an RMF file.
ote If the root node is named "System" or is a "State", do proper selection.
Definition at line 1600 of file pmi1/Analysis.py.