IMP Reference Guide
2.20.0
The Integrative Modeling Platform
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Represent the root node of the global IMP.atom.Hierarchy. More...
Inherits _SystemBase.
Represent the root node of the global IMP.atom.Hierarchy.
Definition at line 153 of file pmi/topology/__init__.py.
Public Member Functions | |
def | __init__ |
Constructor. More... | |
def | add_protocol_output |
Capture details of the modeling protocol. More... | |
def | build |
Build all states. More... | |
def | create_state |
Makes and returns a new IMP.pmi.topology.State in this system. More... | |
def | get_hierarchy |
Return the top-level IMP.atom.Hierarchy node for this system. More... | |
def | get_number_of_states |
Returns the total number of states generated. More... | |
def | get_states |
Get a list of all State objects in this system. More... | |
def IMP.pmi.topology.System.__init__ | ( | self, | |
model = None , |
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name = 'System' |
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) |
Constructor.
model | The IMP::Model in which to construct this system. |
name | The name of the top-level hierarchy node. |
Definition at line 158 of file pmi/topology/__init__.py.
def IMP.pmi.topology.System.add_protocol_output | ( | self, | |
p | |||
) |
Capture details of the modeling protocol.
p | an instance of IMP.pmi.output.ProtocolOutput or a subclass. |
Definition at line 207 of file pmi/topology/__init__.py.
def IMP.pmi.topology.System.build | ( | self, | |
kwargs | |||
) |
Build all states.
Definition at line 199 of file pmi/topology/__init__.py.
def IMP.pmi.topology.System.create_state | ( | self | ) |
Makes and returns a new IMP.pmi.topology.State in this system.
Definition at line 181 of file pmi/topology/__init__.py.
def IMP.pmi.topology.System.get_hierarchy | ( | self | ) |
Return the top-level IMP.atom.Hierarchy node for this system.
Definition at line 195 of file pmi/topology/__init__.py.
def IMP.pmi.topology.System.get_number_of_states | ( | self | ) |
Returns the total number of states generated.
Definition at line 191 of file pmi/topology/__init__.py.
def IMP.pmi.topology.System.get_states | ( | self | ) |
Get a list of all State objects in this system.
Definition at line 177 of file pmi/topology/__init__.py.