IMP.pmi.restraints.saxs.SAXSISDRestraint Class Reference

Basic SAXS restraint using ISD. More...

Inherits RestraintBase.

Detailed Description

Basic SAXS restraint using ISD.

Note

This class is only available in Python.

Definition at line 111 of file restraints/saxs.py.

Public Member Functions
def	draw_gamma
	Draw gamma from lognormal distribution. More...
def	draw_sigma
	Draw 1/sigma2 from gamma distribution. More...
def	get_gamma_value
	Get value of gamma. More...
def	optimize_gamma
	Set gamma to the value that maximizes its conditional likelihood. More...
def	optimize_sigma
	Set sigma to the value that maximizes its conditional likelihood. More...

Member Function Documentation

def IMP.pmi.restraints.saxs.SAXSISDRestraint.draw_gamma

(

self

)

Draw gamma from lognormal distribution.

Definition at line 234 of file restraints/saxs.py.

def IMP.pmi.restraints.saxs.SAXSISDRestraint.draw_sigma

(

self

)

Draw 1/sigma2 from gamma distribution.

Definition at line 229 of file restraints/saxs.py.

def IMP.pmi.restraints.saxs.SAXSISDRestraint.get_gamma_value

(

self

)

Get value of gamma.

Definition at line 222 of file restraints/saxs.py.

def IMP.pmi.restraints.saxs.SAXSISDRestraint.optimize_gamma

(

self

)

Set gamma to the value that maximizes its conditional likelihood.

Definition at line 190 of file restraints/saxs.py.

def IMP.pmi.restraints.saxs.SAXSISDRestraint.optimize_sigma

(

self

)

Set sigma to the value that maximizes its conditional likelihood.

Definition at line 183 of file restraints/saxs.py.

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The documentation for this class was generated from the following file:

• restraints/saxs.py