IMP Reference Guide
2.20.0
The Integrative Modeling Platform
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Perform coarse fitting between two density objects. More...
#include <IMP/em/em_config.h>
#include "exp.h"
#include "DensityMap.h"
#include "SampledDensityMap.h"
#include "SurfaceShellDensityMap.h"
#include "def.h"
#include <vector>
#include <IMP/core/rigid_bodies.h>
#include <IMP/Refiner.h>
#include "masking.h"
Go to the source code of this file.
Namespaces | |
IMP | |
Base functionality and abstract base classes for representation, scoring and sampling. | |
IMP::em | |
Basic utilities for handling cryo-electron microscopy 3D density maps. | |
Functions | |
double | IMP::em::get_coarse_cc_coefficient (const DensityMap *grid1, const DensityMap *grid2, double grid2_voxel_data_threshold, bool allow_padding=false, FloatPair norm_factors=FloatPair(0., 0.)) |
Calculates the cross correlation coefficient between two maps. More... | |
double | IMP::em::get_coarse_cc_local_coefficient (const DensityMap *em_map, DensityMap *model_map, double voxel_data_threshold) |
Local cross correlation function. More... | |
double | IMP::em::get_coarse_cc_score (DensityMap *data, SampledDensityMap *model_map, double scalefactor, bool recalc_rms=true, bool resample=true, FloatPair norm_factors=FloatPair(0., 0.)) |
Calculates the value of the EM fitting term. More... | |
Perform coarse fitting between two density objects.
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Definition in file CoarseCC.h.