IMP Reference Guide
2.14.0
The Integrative Modeling Platform
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Modify the given TransformationSymmetry. More...
#include <IMP/core/symmetry.h>
Modify the given TransformationSymmetry.
The effect of this Mover is similar to applying a RigidBodyMover to every Particle that is affected by the TransformationSymmetry Modifier, that is the transformation of the TransformationSymmetry is modified such that these Particles end up being randomly rotated and translated (relative to their original positions) within a ball of given size. Rotations are made around the given pivot in the reference frame of the reference particles (usually the pivot is one of the particles that is a reference for the TransformationSymmetry).
Definition at line 124 of file core/symmetry.h.
Public Member Functions | |
TransformationSymmetryMover (Model *m, TransformationSymmetry *symm, ParticleIndex pivot, Float max_translation, Float max_rotation) | |
Float | get_maximum_rotation () const |
Float | get_maximum_translation () const |
virtual std::string | get_type_name () const |
virtual ::IMP::VersionInfo | get_version_info () const |
Get information about the module and version of the object. More... | |
void | set_maximum_rotation (Float mr) |
void | set_maximum_translation (Float mt) |
Public Member Functions inherited from IMP::core::MonteCarloMover | |
MonteCarloMover (Model *m, std::string name) | |
void | accept () |
Accept/commit any changes made to the Particles. More... | |
MonteCarloMoverResult | propose () |
Propose a modification. More... | |
void | reject () |
Roll back any changes made to the Particles. More... | |
unsigned int | get_number_of_proposed () const |
unsigned int | get_number_of_accepted () const |
void | reset_statistics () |
Public Member Functions inherited from IMP::ModelObject | |
ModelObject (Model *m, std::string name) | |
bool | get_has_dependencies () const |
Return whether this object has dependencies computed. More... | |
bool | get_has_required_score_states () const |
Return whether score states are computed. More... | |
ModelObjectsTemp | get_inputs () const |
ModelObjectsTemps | get_interactions () const |
Get the interacting sets induced by this ModelObject. More... | |
Model * | get_model () const |
ModelObjectsTemp | get_outputs () const |
const ScoreStatesTemp & | get_required_score_states () const |
Get the score states that are ancestors of this in the dependency graph. More... | |
void | set_has_dependencies (bool tf) |
Either invalidate the dependencies or ensure they are correct. More... | |
void | set_has_required_score_states (bool tf) |
Compute the required score states. More... | |
Public Member Functions inherited from IMP::Object | |
virtual void | clear_caches () |
CheckLevel | get_check_level () const |
LogLevel | get_log_level () const |
void | set_check_level (CheckLevel l) |
void | set_log_level (LogLevel l) |
Set the logging level used in this object. More... | |
void | set_was_used (bool tf) const |
void | show (std::ostream &out=std::cout) const |
const std::string & | get_name () const |
void | set_name (std::string name) |
Protected Member Functions | |
virtual ModelObjectsTemp | do_get_inputs () const |
virtual MonteCarloMoverResult | do_propose () |
Implement propose_move() More... | |
virtual void | do_reject () |
Implement reset_proposed_move() More... | |
Protected Member Functions inherited from IMP::core::MonteCarloMover | |
virtual void | do_accept () |
Implement accept_proposed_move(); default implementation is empty. More... | |
virtual ModelObjectsTemp | do_get_outputs () const |
Protected Member Functions inherited from IMP::ModelObject | |
virtual ModelObjectsTemps | do_get_interactions () const |
virtual void | handle_set_has_required_score_states (bool) |
Protected Member Functions inherited from IMP::Object | |
Object (std::string name) | |
Construct an object with the given name. More... | |
virtual void | do_destroy () |
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protectedvirtual |
Get any Particle, Container or other ModelObjects read by this during evaluation. If you read everything in a container, you can just return that container.
Implements IMP::ModelObject.
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protectedvirtual |
Implement propose_move()
Implements IMP::core::MonteCarloMover.
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protectedvirtual |
Implement reset_proposed_move()
Implements IMP::core::MonteCarloMover.
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virtual |
Get information about the module and version of the object.
Reimplemented from IMP::Object.
Definition at line 157 of file core/symmetry.h.