IMP::atom::Fragment Class Reference

Detailed Description

A decorator to associate a particle with a part of a protein/DNA/RNA.

The decorator stores an optional list of resdiue indexes.

Inheritance diagram for IMP::atom::Fragment:


Public Member Functions
	Fragment (::IMP::Particle *p)
bool	get_contains_residue (int rindex)
	Return true if this fragment contains a given residue.
Ints	get_residue_indexes () const
ResidueIndexIterator	residue_indexes_begin () const
ResidueIndexIterator	residue_indexes_end () const
void	set_residue_indexes (Ints o)
	Add the residues whose indexes are listed in the passed vector.
Static Public Member Functions
static Fragment	decorate_particle (::IMP::Particle *p)
static bool	particle_is_instance (Particle *p)
static Fragment	setup_particle (Particle *p, Fragment o)
	Create a domain by copying from o.
static Fragment	setup_particle (Particle *p)

bool IMP::atom::Fragment::get_contains_residue ( int rindex )

Return true if this fragment contains a given residue.

This could be made more efficient.

The documentation for this class was generated from the following files: