IMP::atom::Diffusion Class Reference

Detailed Description

A decorator for a diffusing particle.

Warning: Diffusion has not been stabilized and is likely to change without notice. The name really should be fixed.

Inheritance diagram for IMP::atom::Diffusion:


Public Member Functions
	Diffusion (::IMP::Particle *p)
Float	get_D_in_cm2_per_second () const
void	set_D_from_radius_in_angstroms (Float r, Float t)
	Set D from the radius in angstroms.
void	set_D_from_radius_in_angstroms (Float r)
	Set D from the radius in angstroms.
void	set_D_in_cm2_per_second (Float t)
Static Public Member Functions
static Diffusion	decorate_particle (::IMP::Particle *p)
static FloatKey	get_D_key ()
	Get the D key.
static bool	particle_is_instance (Particle *p)
	Return true if the particle is an instance of an Diffusion.
static Diffusion	setup_particle (Particle *p, Float D=0)
static Diffusion	setup_particle (Particle *p, const algebra::VectorD< 3 > &v, Float D)

void IMP::atom::Diffusion::set_D_from_radius_in_angstroms	(	Float	r,
		Float	t
	)

Set D from the radius in angstroms.

t is in kelvin

void IMP::atom::Diffusion::set_D_from_radius_in_angstroms ( Float r )

Set D from the radius in angstroms.

Use default temperature.

static Diffusion IMP::atom::Diffusion::setup_particle	(	Particle *	p,
		Float	D = `0`
	)			`[static]`

Create a decorator with the a given D. D is assumed to be in cm2/sec and the particle is assumed to already have x,y,z attributes

static Diffusion IMP::atom::Diffusion::setup_particle	(	Particle *	p,
		const algebra::VectorD< 3 > &	v,
		Float	D
	)			`[static]`

Create a decorator with the passed coordinates and D. D is assumed to be in cm2/sec.

The documentation for this class was generated from the following files: